explanation      blue bibcodes open ADS page with paths to full text
Author name code: demoortel
ADS astronomy entries on 2022-09-14
author:"De Moortel, Ineke" 

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Title: Propagating Alfvén waves in open structures with random
    structuring
Authors: Pascoe, D. J.; De Moortel, I.; Pagano, P.; Howson, T. A.
2022MNRAS.tmp.2248P    Altcode:
  We consider the behaviour of Alfvén waves propagating in a medium
  with random density perturbations. The imposed density perturbations
  have a broadband spectrum and their characteristic spatial scale may be
  defined according to the peak in the spectrum. The interaction of the
  boundary driven Alfvén waves with the medium generates reflections
  most efficiently when their wavelength is comparable to the spatial
  scale of the density perturbations. For our monotonic driver, this
  leads to the generation of quasi-periodic oscillations. The periods
  of oscillation of the propagating Alfvén waves is no longer only
  associated with the driver. Additional periodicities may be associated
  with one or more characteristic spatial scales in the density profile,
  or with beating between other spectral components. Multiple wave
  reflections cause oscillatory power to be retained at low altitudes,
  increasing opportunities to contribute to heating at those locations.

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Title: The effects of driving time scales on coronal heating in a
    stratified atmosphere
Authors: Howson, T. A.; De Moortel, I.
2022A&A...661A.144H    Altcode: 2022arXiv220412205H
  <BR /> Aims: We investigate the atmospheric response to coronal
  heating driven by random velocity fields with different characteristic
  time scales and amplitudes. <BR /> Methods: We conducted a series
  of three-dimensional magnetohydrodynamic simulations of random
  driving imposed on a gravitationally stratified model of the solar
  atmosphere. In order to understand differences between alternating
  current (AC) and direct current (DC) heating, we considered the
  effects of changing the characteristic time scales of the imposed
  velocities. We also investigated the effects of the magnitude of
  the velocity driving. <BR /> Results: In all cases, complex foot
  point motions lead to a proliferation of current sheets and energy
  dissipation throughout the coronal volume. For a given driving
  amplitude, DC driving typically leads to a greater rate of energy
  injection when compared to AC driving. This ultimately leads to the
  formation of larger currents, increased heating rates, and higher
  coronal temperatures in DC simulations. There is no difference in the
  spatial distribution of energy dissipation across simulations; however,
  energy release events in AC cases tend to be more frequent and last for
  less time than in DC cases. This results in more asymmetric temperature
  profiles for field lines heated by AC drivers. Higher velocity driving
  is associated with larger currents, higher temperatures, and the
  corona occupying a larger fraction of the simulation volume. In all
  cases, the majority of heating is associated with small energy release
  events, which occur much more frequently than larger events. <BR />
  Conclusions: When combined with observational results that highlight
  a greater abundance of oscillatory power in lower frequency modes,
  these findings suggest that energy release in the corona is more
  likely to be driven by longer time scale motions. In the corona,
  AC and DC driving occur concurrently and their effects remain
  difficult to isolate. The distribution of field line temperatures
  and the asymmetry of temperature profiles may reveal the frequency
  and longevity of energy release events and therefore the relative
  importance of AC and DC heating. <P />Movies are available at <A
  href="https://www.aanda.org/10.1051/0004-6361/202142872/olm">https://www.aanda.org</A>

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Title: Coronal Seismology Using Damping of Propagating Kink Waves
Authors: Pascoe, D. J.; Van Doorsselaere, T.; De Moortel, I.
2022ApJ...929..101P    Altcode:
  We consider the use of propagating kink waves, such as those
  observed by the Coronal Multi-channel Polarimeter, as a diagnostic
  technique. The transverse structuring of the plasma may be inferred by
  the frequency-dependent wave damping, which is attributed to resonant
  absorption. We include the effect of reflection of waves at the loop
  footpoints, which leads to the asymmetry parameter, describing the ratio
  of driven wave power at the footpoints becoming weakly constrained. The
  classical model of resonant absorption based on an exponential damping
  profile significantly overestimates the damping rate in coronal loops
  with low density contrast ratios. The use of the exponential profile in
  an analysis of observations therefore leads to underestimates for the
  density contrast ratio and associated parameters such as the heating
  rate following phase mixing.

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Title: Probing the Physics of the Solar Atmosphere with the Multi-slit
    Solar Explorer (MUSE). I. Coronal Heating
Authors: De Pontieu, Bart; Testa, Paola; Martínez-Sykora, Juan;
   Antolin, Patrick; Karampelas, Konstantinos; Hansteen, Viggo; Rempel,
   Matthias; Cheung, Mark C. M.; Reale, Fabio; Danilovic, Sanja; Pagano,
   Paolo; Polito, Vanessa; De Moortel, Ineke; Nóbrega-Siverio, Daniel;
   Van Doorsselaere, Tom; Petralia, Antonino; Asgari-Targhi, Mahboubeh;
   Boerner, Paul; Carlsson, Mats; Chintzoglou, Georgios; Daw, Adrian;
   DeLuca, Edward; Golub, Leon; Matsumoto, Takuma; Ugarte-Urra, Ignacio;
   McIntosh, Scott W.; the MUSE Team
2022ApJ...926...52D    Altcode: 2021arXiv210615584D
  The Multi-slit Solar Explorer (MUSE) is a proposed mission composed of
  a multislit extreme ultraviolet (EUV) spectrograph (in three spectral
  bands around 171 Å, 284 Å, and 108 Å) and an EUV context imager (in
  two passbands around 195 Å and 304 Å). MUSE will provide unprecedented
  spectral and imaging diagnostics of the solar corona at high spatial
  (≤0.″5) and temporal resolution (down to ~0.5 s for sit-and-stare
  observations), thanks to its innovative multislit design. By obtaining
  spectra in four bright EUV lines (Fe IX 171 Å, Fe XV 284 Å, Fe XIX-Fe
  XXI 108 Å) covering a wide range of transition regions and coronal
  temperatures along 37 slits simultaneously, MUSE will, for the first
  time, "freeze" (at a cadence as short as 10 s) with a spectroscopic
  raster the evolution of the dynamic coronal plasma over a wide range of
  scales: from the spatial scales on which energy is released (≤0.″5)
  to the large-scale (~170″ × 170″) atmospheric response. We use
  numerical modeling to showcase how MUSE will constrain the properties of
  the solar atmosphere on spatiotemporal scales (≤0.″5, ≤20 s) and
  the large field of view on which state-of-the-art models of the physical
  processes that drive coronal heating, flares, and coronal mass ejections
  (CMEs) make distinguishing and testable predictions. We describe the
  synergy between MUSE, the single-slit, high-resolution Solar-C EUVST
  spectrograph, and ground-based observatories (DKIST and others), and
  the critical role MUSE plays because of the multiscale nature of the
  physical processes involved. In this first paper, we focus on coronal
  heating mechanisms. An accompanying paper focuses on flares and CMEs.

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Title: A Fast and Accurate Method to Capture the Solar
    Corona/Transition Region Enthalpy Exchange in Multi-dimensional
    Magnetohydrodynamic Simulations
Authors: Johnston, Craig; Hood, Alan; De Moortel, Ineke; Daldorff, Lars
2021AGUFMSH12B..03J    Altcode:
  The brightness of the emission from coronal loops in the solar
  atmosphere is strongly dependent on the temperature and density of
  the confined plasma. Following an impulsive release of energy, the
  coronal plasma undergoes phases of upflow and downflow as it cools,
  with significant variations in its properties. In particular, the
  sudden increase in coronal temperature leads to an excess downward
  heat flux that the transition region (TR) is unable to radiate. This
  generates an upflow of mass and enthalpy from the TR to the corona,
  increasing the coronal density. The mass and enthalpy exchange is
  highly sensitive to the TR resolution in numerical simulations. With
  a numerically under-resolved TR, major errors occur in simulating the
  coronal density evolution and, thus, the predicted loop emission. We
  present a new method that addresses the difficulty of obtaining
  the correct interaction between the corona and corona/chromosphere
  interface. In the TR, an Adaptive Conduction method is used that
  artificially broadens any unresolved parts of the atmosphere, allowing
  them to be resolved while maintaining the correct physics. I will
  show that this approach, referred to as TRAC, successfully removes the
  influence of numerical resolution on the coronal density response to
  heating while maintaining high levels of agreement with fully resolved
  models. A detailed analytical assessment of the TRAC method will also
  be presented to demonstrate why the approach works through all phases
  of an impulsive heating event.

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Title: Investigating coronal wave energy estimates using synthetic
    non-thermal line widths
Authors: Fyfe, L. E.; Howson, T. A.; De Moortel, I.; Pant, V.; Van
   Doorsselaere, T.
2021A&A...656A..56F    Altcode: 2021arXiv211000257F
  <BR /> Aims: Estimates of coronal wave energy remain uncertain as a
  large fraction of the energy is likely hidden in the non-thermal line
  widths of emission lines. In order to estimate these wave energies,
  many previous studies have considered the root mean squared wave
  amplitudes to be a factor of \sqrt{2} greater than the non-thermal
  line widths. However, other studies have used different factors. To
  investigate this problem, we consider the relation between wave
  amplitudes and the non-thermal line widths within a variety of 3D
  magnetohydrodynamic (MHD) simulations. <BR /> Methods: We consider
  the following 3D numerical models: Alfvén waves in a uniform magnetic
  field, transverse waves in a complex braided magnetic field, and two
  simulations of coronal heating in an arcade. We applied the forward
  modelling code FoMo to generate the synthetic emission data required
  to analyse the non-thermal line widths. <BR /> Results: Determining
  a single value for the ratio between the non-thermal line widths and
  the root mean squared wave amplitudes is not possible across multiple
  simulations. It was found to depend on a variety of factors, including
  line-of-sight angles, velocity magnitudes, wave interference, and
  exposure time. Indeed, some of our models achieved the values claimed
  in recent articles while other more complex models deviated from these
  ratios. <BR /> Conclusions: To estimate wave energies, an appropriate
  relation between the non-thermal line widths and root mean squared
  wave amplitudes is required. However, evaluating this ratio to be a
  singular value, or even providing a lower or upper bound on it, is
  not realistically possible given its sensitivity to various MHD models
  and factors. As the ratio between wave amplitudes and non-thermal line
  widths is not constant across our models, we suggest that this widely
  used method for estimating wave energy is not robust.

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Title: Magnetic reconnection and the Kelvin-Helmholtz instability
    in the solar corona
Authors: Howson, T. A.; De Moortel, I.; Pontin, D. I.
2021A&A...656A.112H    Altcode: 2021arXiv210915019H
  Context. The magnetic Kelvin-Helmholtz instability (KHI) has been
  proposed as a means of generating magnetohydrodynamic turbulence
  and encouraging wave energy dissipation in the solar corona,
  particularly within transversely oscillating loops. <BR /> Aims:
  Our goal is to determine whether the KHI encourages magnetic
  reconnection in oscillating flux tubes in the solar corona. This will
  establish whether the instability enhances the dissipation rate of
  energy stored in the magnetic field. <BR /> Methods: We conducted a
  series of three-dimensional magnetohydrodynamic simulations of the
  KHI excited by an oscillating velocity shear. We investigated the
  effects of numerical resolution, field line length, and background
  currents on the growth rate of the KHI and on the subsequent rate
  of magnetic reconnection. <BR /> Results: The KHI is able to trigger
  magnetic reconnection in all cases, with the highest rates occurring
  during the initial growth phase. Reconnection is found to occur
  preferentially along the boundaries of Kelvin-Helmholtz vortices,
  where the shear in the velocity and magnetic fields is greatest. The
  estimated rate of reconnection is found to be lowest in simulations
  where the KHI growth rate is reduced. For example, this is the case
  for shorter field lines or due to shear in the background field. <BR />
  Conclusions: In non-ideal regimes, the onset of the instability causes
  the local reconnection of magnetic field lines and enhances the rate
  of coronal wave heating. However, we found that if the equilibrium
  magnetic field is sheared across the Kelvin-Helmholtz mixing layer,
  the instability does not significantly enhance the rate of reconnection
  of the background field, despite the free energy associated with the
  non-potential field.

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Title: Forward modelling of heating within a coronal arcade
Authors: Fyfe, L. E.; Howson, T. A.; De Moortel, I.
2021A&A...656A.120F    Altcode: 2021arXiv211014257F
  <BR /> Aims: We investigate the synthetic observational signatures
  generated from numerical models of coronal heating in an arcade in
  order to determine what features are associated with such heating and
  what tools can be used to identify them. <BR /> Methods: We consider
  two simulations of coronal arcades driven by footpoint motions with
  different characteristic timescales. Forward modelling is then
  conducted, and the synthetic emission data are analysed (e.g.,
  intensities, Doppler shifts, line widths and estimated kinetic
  energies). <BR /> Results: The total intensity and Doppler shift
  perturbations clearly show the magnetic structure of the coronal
  arcade. Contrasts in the local Doppler velocity also highlight
  the locations of separatrix surfaces. The distinguishing feature
  of the models with short and long timescale photospheric motions
  (in comparison to the Alfvén travel time along a loop) is that
  of the frequencies. Through fast Fourier transform analysis of the
  Doppler velocities, it is clear that when short timescale footpoint
  motions are present, higher frequency perturbations are observed. For
  longer timescale footpoint motions, the dominant signal is that of
  lower frequencies; however, higher (but less powerful) frequencies
  were also detected, which matched the natural Alfvén frequency of
  the background magnetic field. Signatures of Alfvénic waves were
  identified in both models, with fast wave signatures observable when
  short timescale driving is present. Finally, we examine the estimates
  of the kinetic energy using the Doppler velocities and find it to be
  significantly underestimated within these models. <BR /> Conclusions:
  All of the observables within this article behave as one would expect,
  given the evolution of the plasma parameters. Such features were,
  for example, Alfvén waves, fast waves, the arcade structure and
  separatrix surfaces. We were able to differentiate between the two
  models by examining the frequencies present. The Doppler velocities
  cannot provide accurate estimates of the total kinetic energy or even
  the component parallel to the line-of-sight (LOS). This is due to
  some of the plasma being outside the formation temperature of the ion,
  the multi-directional driver limiting the proportion of the velocity
  aligned along the LOS, and cancellation of the velocity along the
  LOS. The exact impact each factor has on the estimation is dependent
  on the setup of the model and the emission line under investigation.

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Title: Magnetohydrodynamic Waves in Open Coronal Structures
Authors: Banerjee, D.; Krishna Prasad, S.; Pant, V.; McLaughlin, J. A.;
   Antolin, P.; Magyar, N.; Ofman, L.; Tian, H.; Van Doorsselaere, T.;
   De Moortel, I.; Wang, T. J.
2021SSRv..217...76B    Altcode: 2020arXiv201208802B
  Modern observatories have revealed the ubiquitous presence of
  magnetohydrodynamic waves in the solar corona. The propagating waves
  (in contrast to the standing waves) are usually originated in the lower
  solar atmosphere which makes them particularly relevant to coronal
  heating. Furthermore, open coronal structures are believed to be the
  source regions of solar wind, therefore, the detection of MHD waves
  in these structures is also pertinent to the acceleration of solar
  wind. Besides, the advanced capabilities of the current generation
  telescopes have allowed us to extract important coronal properties
  through MHD seismology. The recent progress made in the detection,
  origin, and damping of both propagating slow magnetoacoustic waves and
  kink (Alfvénic) waves is presented in this review article especially
  in the context of open coronal structures. Where appropriate, we give
  an overview on associated theoretical modelling studies. A few of the
  important seismological applications of these waves are discussed. The
  possible role of Alfvénic waves in the acceleration of solar wind is
  also touched upon.

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Title: A fast multi-dimensional magnetohydrodynamic formulation of
    the transition region adaptive conduction (TRAC) method
Authors: Johnston, C. D.; Hood, A. W.; De Moortel, I.; Pagano, P.;
   Howson, T. A.
2021A&A...654A...2J    Altcode: 2021arXiv210603989J
  We have demonstrated that the transition region adaptive conduction
  (TRAC) method permits fast and accurate numerical solutions of the
  field-aligned hydrodynamic equations, successfully removing the
  influence of numerical resolution on the coronal density response
  to impulsive heating. This is achieved by adjusting the parallel
  thermal conductivity, radiative loss, and heating rates to broaden the
  transition region (TR), below a global cutoff temperature, so that
  the steep gradients are spatially resolved even when using coarse
  numerical grids. Implementing the original 1D formulation of TRAC in
  multi-dimensional magnetohydrodynamic (MHD) models would require tracing
  a large number of magnetic field lines at every time step in order to
  prescribe a global cutoff temperature to each field line. In this paper,
  we present a highly efficient formulation of the TRAC method for use
  in multi-dimensional MHD simulations, which does not rely on field
  line tracing. In the TR, adaptive local cutoff temperatures are used
  instead of global cutoff temperatures to broaden any unresolved parts
  of the atmosphere. These local cutoff temperatures are calculated using
  only local grid cell quantities, enabling the MHD extension of TRAC to
  efficiently account for the magnetic field evolution, without tracing
  field lines. Consistent with analytical predictions, we show that this
  approach successfully preserves the properties of the original TRAC
  method. In particular, the total radiative losses and heating remain
  conserved under the MHD formulation. Results from 2D MHD simulations
  of impulsive heating in unsheared and sheared arcades of coronal
  loops are also presented. These simulations benchmark the MHD TRAC
  method against a series of 1D models and demonstrate the versatility
  and robustness of the method in multi-dimensional magnetic fields. We
  show, for the first time, that pressure differences, generated during
  the evaporation phase of impulsive heating events, can produce current
  layers that are significantly narrower than the transverse energy
  deposition. <P />Movies associated to Figs. 4 and 8 are available at <A
  href="https://www.aanda.org/10.1051/0004-6361/202140987/olm">https://www.aanda.org</A>

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Title: The Heating of the Solar Corona
Authors: Viall, Nicholeen M.; De Moortel, Ineke; Downs, Cooper;
   Klimchuk, James A.; Parenti, Susanna; Reale, Fabio
2021GMS...258...35V    Altcode:
  No abstract at ADS

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Title: Coronal Heating by MHD Waves
Authors: Van Doorsselaere, Tom; Srivastava, Abhishek K.; Antolin,
   Patrick; Magyar, Norbert; Vasheghani Farahani, Soheil; Tian, Hui;
   Kolotkov, Dmitrii; Ofman, Leon; Guo, Mingzhe; Arregui, Iñigo; De
   Moortel, Ineke; Pascoe, David
2020SSRv..216..140V    Altcode: 2020arXiv201201371V
  The heating of the solar chromosphere and corona to the observed high
  temperatures, imply the presence of ongoing heating that balances
  the strong radiative and thermal conduction losses expected in the
  solar atmosphere. It has been theorized for decades that the required
  heating mechanisms of the chromospheric and coronal parts of the active
  regions, quiet-Sun, and coronal holes are associated with the solar
  magnetic fields. However, the exact physical process that transport
  and dissipate the magnetic energy which ultimately leads to the solar
  plasma heating are not yet fully understood. The current understanding
  of coronal heating relies on two main mechanism: reconnection and MHD
  waves that may have various degrees of importance in different coronal
  regions. In this review we focus on recent advances in our understanding
  of MHD wave heating mechanisms. First, we focus on giving an overview
  of observational results, where we show that different wave modes have
  been discovered in the corona in the last decade, many of which are
  associated with a significant energy flux, either generated in situ
  or pumped from the lower solar atmosphere. Afterwards, we summarise
  the recent findings of numerical modelling of waves, motivated by the
  observational results. Despite the advances, only 3D MHD models with
  Alfvén wave heating in an unstructured corona can explain the observed
  coronal temperatures compatible with the quiet Sun, while 3D MHD wave
  heating models including cross-field density structuring are not yet
  able to account for the heating of coronal loops in active regions to
  their observed temperature.

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Title: Effect of coronal loop structure on wave heating through
    phase mixing
Authors: Pagano, P.; De Moortel, I.; Morton, R. J.
2020A&A...643A..73P    Altcode: 2020arXiv200904366P
  Context. The mechanism(s) behind coronal heating still elude(s)
  direct observation and modelling of viable theoretical processes and
  the subsequent effect on coronal structures is one of the key tools
  available to assess possible heating mechanisms. Wave heating via the
  phase mixing of magnetohydrodynamic (MHD) transverse waves has been
  proposed as a possible way to convert magnetic energy into thermal
  energy, but MHD models increasingly suggest this is not an efficient
  enough mechanism. <BR /> Aims: We modelled heating by phase mixing
  transverse MHD waves in various configurations in order to investigate
  whether certain circumstances can enhance the heating sufficiently
  to sustain the million degree solar corona and to assess the impact
  of the propagation and phase mixing of transverse MHD waves on the
  structure of the boundary shell of coronal loops. <BR /> Methods:
  We used 3D MHD simulations of a pre-existing density enhancement in a
  magnetised medium and a boundary driver to trigger the propagation of
  transverse waves with the same power spectrum as measured by the Coronal
  Multi-Channel Polarimeter. We consider different density structures,
  boundary conditions at the non-drive footpoint, characteristics of the
  driver, and different forms of magnetic resistivity. <BR /> Results:
  We find that different initial density structures significantly
  affect the evolution of the boundary shell and that some driver
  configurations can enhance the heating generated from the dissipation
  of the MHD waves. In particular, drivers coherent on a larger spatial
  scale and higher dissipation coefficients can generate significant
  heating, although it is still insufficient to balance the radiative
  losses in this setup. <BR /> Conclusions: We conclude that while
  phase mixing of transverse MHD waves is unlikely to sustain the
  thermal structure of the corona, there are configurations that allow
  for an enhanced efficiency of this mechanism. We provide possible
  signatures to identify the presence of such configurations, such as
  the location of where the heating is deposited along the coronal
  loop. <P />Movies associated to Figs. 4 and 8 are available at <A
  href="https://www.aanda.org/10.1051/0004-6361/202039209/olm">https://www.aanda.org</A>

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Title: Forward modelling of MHD waves in braided magnetic fields
Authors: Fyfe, L. E.; Howson, T. A.; De Moortel, I.
2020A&A...643A..86F    Altcode: 2020arXiv200908301F
  <BR /> Aims: We investigate synthetic observational signatures
  generated from numerical models of transverse waves propagating in
  complex (braided) magnetic fields. <BR /> Methods: We consider two
  simulations with different levels of magnetic field braiding and impose
  periodic, transverse velocity perturbations at the lower boundary. As
  the waves reflect off the top boundary, a complex pattern of wave
  interference occurs. We applied the forward modelling code FoMo and
  analysed the synthetic emission data. We examined the line intensity,
  Doppler shifts, and kinetic energy along several line-of-sight (LOS)
  angles. <BR /> Results: The Doppler shift perturbations clearly show
  the presence of the transverse (Alfvénic) waves. However, in the
  total intensity, and running difference, the waves are less easily
  observed for more complex magnetic fields and may be indistinguishable
  from background noise. Depending on the LOS angle, the observable
  signatures of the waves reflect some of the magnetic field braiding,
  particularly when multiple emission lines are available, although it
  is not possible to deduce the actual level of complexity. In the more
  braided simulation, signatures of phase mixing can be identified. We
  highlight possible ambiguities in the interpretation of the wave
  modes based on the synthetic emission signatures. <BR /> Conclusions:
  Most of the observables discussed in this article behave in the manner
  expected, given knowledge of the evolution of the parameters in the 3D
  simulations. Nevertheless, some intriguing observational signatures are
  present. Identifying regions of magnetic field complexity is somewhat
  possible when waves are present; although, even then, simultaneous
  spectroscopic imaging from different lines is important in order to
  identify these locations. Care needs to be taken when interpreting
  intensity and Doppler velocity signatures as torsional motions, as
  is done in our setup. These types of signatures are a consequence of
  the complex nature of the magnetic field, rather than real torsional
  waves. Finally, we investigate the kinetic energy, which was estimated
  from the Doppler velocities and is highly dependent on the polarisation
  of the wave, the complexity of the background field, and the LOS angles.

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Title: The effects of driving time scales on heating in a coronal
    arcade
Authors: Howson, T. A.; De Moortel, I.; Fyfe, L. E.
2020A&A...643A..85H    Altcode: 2020arXiv200907535H
  Context. The relative importance of alternating current (AC) and direct
  current (DC) heating mechanisms in maintaining the temperature of the
  solar corona is not well constrained. <BR /> Aims: We aim to investigate
  the effects of the characteristic time scales of photospheric driving
  on the injection and dissipation of magnetic and kinetic energy within
  a coronal arcade. <BR /> Methods: We conducted three-dimensional
  magnetohydrodynamic simulations of complex foot point driving imposed
  on a potential coronal arcade. We modified the typical time scales
  associated with the velocity driver to understand the efficiency of
  heating obtained using AC and DC drivers. We considered the implications
  for the injected Poynting flux and the spatial and temporal nature
  of the energy release in dissipative regimes. <BR /> Results: For
  the same driver amplitude and complexity, long time scale velocity
  motions are able to inject a much greater Poynting flux of energy
  into the corona. Consequently, in non-ideal regimes, slow stressing
  motions result in a greater increase in plasma temperature than for
  wave-like driving. In dissipative simulations, Ohmic heating is found
  to be much more significant than viscous heating. For all drivers in
  our parameter space, energy dissipation is greatest close to the base
  of the arcade, where the magnetic field strength is strongest, and at
  separatrix surfaces, where the field connectivity changes. Across all
  simulations, the background field is stressed with random foot point
  motions (in a manner more typical of DC heating studies), and, even
  for short time scale driving, the injected Poynting flux is large given
  the small amplitude flows considered. For long time scale driving, the
  rate of energy injection was comparable to the expected requirements
  in active regions. The heating rates were found to scale with the
  perturbed magnetic field strength and not the total field strength. <BR
  /> Conclusions: Alongside recent studies that show that power within
  the corona is dominated by low frequency motions, our results suggest
  that, in the closed corona, DC heating is more significant than
  AC heating. <P />Movies associated to Fig. 3 are available at <A
  href="https://www.aanda.org/10.1051/0004-6361/202038869/olm">https://www.aanda.org</A>

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Title: Alfvén on heating by waves
Authors: De Moortel, Ineke; Falconer, Isobel; Stack, Robert
2020A&G....61b2.34D    Altcode:
  Ineke De Moortel, Isobel Falconer and Robert Stack explore the
  achievements and influence of Hannes Alfvén, in particular his seminal
  Monthly Notices paper of 1947 on the heating of the solar corona.

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Title: Phase mixing and wave heating in a complex coronal plasma
Authors: Howson, T. A.; De Moortel, I.; Reid, J.
2020A&A...636A..40H    Altcode: 2020arXiv200305226H
  <BR /> Aims: We investigate the formation of small scales and the
  related dissipation of magnetohydronamic (MHD) wave energy through
  non-linear interactions of counter-propagating, phase-mixed Alfvénic
  waves in a complex magnetic field. <BR /> Methods: We conducted fully
  three-dimensional, non-ideal MHD simulations of transverse waves
  in complex magnetic field configurations. Continuous wave drivers
  were imposed on the foot points of magnetic field lines and the
  system was evolved for several Alfvén travel times. Phase-mixed
  waves were allowed to reflect off the upper boundary and the
  interactions between the resultant counter-streaming wave packets
  were analysed. <BR /> Results: The complex nature of the background
  magnetic field encourages the development of phase mixing throughout
  the numerical domain, leading to a growth in alternating currents and
  vorticities. Counter-propagating phase-mixed MHD wave modes induce a
  cascade of energy to small scales and result in more efficient wave
  energy dissipation. This effect is enhanced in simulations with more
  complex background fields. High-frequency drivers excite localised
  field line resonances and produce efficient wave heating. However, this
  relies on the formation of large amplitude oscillations on resonant
  field lines. Drivers with smaller frequencies than the fundamental
  frequencies of field lines are not able to excite resonances and thus
  do not inject sufficient Poynting flux to power coronal heating. Even
  in the case of high-frequency oscillations, the rate of dissipation
  is likely too slow to balance coronal energy losses, even within
  the quiet Sun. <BR /> Conclusions: For the case of the generalised
  phase-mixing presented here, complex background field structures
  enhance the rate of wave energy dissipation. However, it remains
  difficult for realistic wave drivers to inject sufficient Poynting
  flux to heat the corona. Indeed, significant heating only occurs in
  cases which exhibit oscillation amplitudes that are much larger than
  those currently observed in the solar atmosphere.

---------------------------------------------------------
Title: Chromospheric evaporation and phase mixing of Alfvén waves
    in coronal loops
Authors: Van Damme, H. J.; De Moortel, I.; Pagano, P.; Johnston, C. D.
2020A&A...635A.174V    Altcode: 2020arXiv200211695V
  Context. Phase mixing of Alfvén waves has been studied extensively as a
  possible coronal heating mechanism but without the full thermodynamic
  consequences considered self-consistently. It has been argued
  that in some cases, the thermodynamic feedback of the heating could
  substantially affect the transverse density gradient and even inhibit
  the phase mixing process. <BR /> Aims: In this paper, for the first
  time, we use magnetohydrodynamic (MHD) simulations with the appropriate
  thermodynamical terms included to quantify the evaporation following
  heating by phase mixing of Alfvén waves in a coronal loop and the
  effect of this evaporation on the transverse density profile. <BR
  /> Methods: The numerical simulations were performed using the
  Lagrangian Remap code Lare2D. We set up a 2D loop model consisting
  of a field-aligned thermodynamic equilibrium and a cross-field
  (background) heating profile. A continuous, sinusoidal, high-frequency
  Alfvén wave driver was implemented. As the Alfvén waves propagate
  along the field, they undergo phase mixing due to the cross-field
  density gradient in the coronal part of the loop. We investigated the
  presence of field-aligned flows, heating from the dissipation of the
  phase-mixed Alfvén waves, and the subsequent evaporation from the lower
  atmosphere. <BR /> Results: We find that phase mixing of Alfvén waves
  leads to modest heating in the shell regions of the loop and evaporation
  of chromospheric material into the corona with upflows of the order of
  only 5-20 m s<SUP>-1</SUP>. Although the evaporation leads to a mass
  increase in the shell regions of the loop, the effect on the density
  gradient and, hence, on the phase mixing process, is insignificant. <BR
  /> Conclusions: This paper self-consistently investigates the effect
  of chromospheric evaporation on the cross-field density gradient and
  the phase mixing process in a coronal loop. We found that the effects
  in our particular setup (small amplitude, high frequency waves) are
  too small to significantly change the density gradient.

---------------------------------------------------------
Title: Modelling the solar transition region using an adaptive
    conduction method
Authors: Johnston, C. D.; Cargill, P. J.; Hood, A. W.; De Moortel,
   I.; Bradshaw, S. J.; Vaseekar, A. C.
2020A&A...635A.168J    Altcode: 2020arXiv200201887J
  Modelling the solar Transition Region with the use of an Adaptive
  Conduction (TRAC) method permits fast and accurate numerical solutions
  of the field-aligned hydrodynamic equations, capturing the enthalpy
  exchange between the corona and transition region, when the corona
  undergoes impulsive heating. The TRAC method eliminates the need
  for highly resolved numerical grids in the transition region and the
  commensurate very short time steps that are required for numerical
  stability. When employed with coarse spatial resolutions, typically
  achieved in multi-dimensional magnetohydrodynamic codes, the errors at
  peak density are less than 5% and the computation time is three orders
  of magnitude faster than fully resolved field-aligned models. This
  paper presents further examples that demonstrate the versatility and
  robustness of the method over a range of heating events, including
  impulsive and quasi-steady footpoint heating. A detailed analytical
  assessment of the TRAC method is also presented, showing that the
  approach works through all phases of an impulsive heating event
  because (i) the total radiative losses and (ii) the total heating
  when integrated over the transition region are both preserved at all
  temperatures under the broadening modifications of the method. The
  results from the numerical simulations complement this conclusion.

---------------------------------------------------------
Title: Resonant absorption in expanding coronal magnetic flux tubes
    with uniform density
Authors: Howson, T. A.; De Moortel, I.; Antolin, P.; Van Doorsselaere,
   T.; Wright, A. N.
2019A&A...631A.105H    Altcode: 2019arXiv190910781H
  <BR /> Aims: We investigate the transfer of energy between a fundamental
  standing kink mode and azimuthal Alfvén waves within an expanding
  coronal magnetic flux tube. We consider the process of resonant
  absorption in a loop with a non-uniform Alfvén frequency profile but
  in the absence of a radial density gradient. <BR /> Methods: Using the
  three dimensional magnetohydrodynamic (MHD) code, Lare3d, we modelled a
  transversely oscillating magnetic flux tube that expands radially with
  height. An initially straight loop structure with a magnetic field
  enhancement was allowed to relax numerically towards a force-free
  state before a standing kink mode was introduced. The subsequent
  dynamics, rate of wave damping and formation of small length scales are
  considered. <BR /> Results: We demonstrate that the transverse gradient
  in Alfvén frequency required for the existence of resonant field lines
  can be associated with the expansion of a high field-strength flux tube
  from concentrated flux patches in the lower solar atmosphere. This
  allows for the conversion of energy between wave modes even in the
  absence of the transverse density profile typically assumed in wave
  heating models. As with standing modes in straight flux tubes, small
  scales are dominated by the vorticity at the loop apex and by currents
  close to the loop foot points. The azimuthal Alfvén wave exhibits the
  structure of the expanded flux tube and is therefore associated with
  smaller length scales close to the foot points of the flux tube than
  at the loop apex. <BR /> Conclusions: Resonant absorption can proceed
  throughout the coronal volume, even in the absence of visible, dense,
  loop structures. The flux tube and MHD waves considered are difficult
  to observe and our model highlights how estimating hidden wave power
  within the Sun's atmosphere can be problematic. We highlight that,
  for standing modes, the global properties of field lines are important
  for resonant absorption and coronal conditions at a single altitude
  will not fully determine the nature of MHD resonances. In addition,
  we provide a new model in partial response to the criticism that wave
  heating models cannot self-consistently generate or sustain the density
  profile upon which they typically rely.

---------------------------------------------------------
Title: Magnetohydrodynamic waves in braided magnetic fields
Authors: Howson, T. A.; De Moortel, I.; Reid, J.; Hood, A. W.
2019A&A...629A..60H    Altcode: 2019arXiv190803089H
  <BR /> Aims: We investigate the propagation of transverse
  magnetohydrodynamic (MHD) wave fronts through a coronal plasma
  containing a braided magnetic field. <BR /> Methods: We performed
  a series of three dimensional MHD simulations in which a small
  amplitude, transverse velocity perturbation is introduced into a
  complex magnetic field. We analysed the deformation of the wave
  fronts as the perturbation propagates through the braided magnetic
  structures and explore the nature of Alfvénic wave phase mixing in
  this regime. We considered the effects of viscous dissipation in a
  weakly non-ideal plasma and evaluate the effects of field complexity
  on wave energy dissipation. <BR /> Results: Spatial gradients in the
  local Alfvén speed and variations in the length of magnetic field
  lines ensure that small scales form throughout the propagating wave
  front due to phase mixing. Additionally, the presence of complex,
  intricate current sheets associated with the background field locally
  modifies the polarisation of the wave front. The combination of these
  two effects enhances the rate of viscous dissipation, particularly in
  more complex field configurations. Unlike in classical phase mixing
  configurations, the greater spatial extent of Alfvén speed gradients
  ensures that wave energy is deposited over a larger cross-section
  of the magnetic structure. Further, the complexity of the background
  magnetic field ensures that small gradients in a wave driver can map
  to large gradients within the coronal plasma. <BR /> Conclusions:
  The phase mixing of transverse MHD waves in a complex magnetic
  field will progress throughout the braided volume. As a result,
  in a non-ideal regime wave energy will be dissipated over a greater
  cross-section than in classical phase mixing models. The formation
  rate of small spatial scales in a propagating wave front is a function
  of the complexity of the background magnetic field. As such, if the
  coronal field is sufficiently complex it remains plausible that phase
  mixing induced wave heating can contribute to maintaining the observed
  temperatures. Furthermore, the weak compressibility of the transverse
  wave and the observed phase mixing pattern may provide seismological
  information about the nature of the background plasma.

---------------------------------------------------------
Title: MHD simulations of the in situ generation of kink and sausage
    waves in the solar corona by collision of dense plasma clumps
Authors: Pagano, P.; Van Damme, H. J.; Antolin, P.; De Moortel, I.
2019A&A...626A..53P    Altcode: 2019arXiv190503749P
  Context. Magnetohydrodynamic (MHD) waves are ubiquitous in the solar
  corona where the highly structured magnetic fields provide efficient
  wave guides for their propagation. While MHD waves have been observed
  originating from lower layers of the solar atmosphere, recent studies
  have shown that some can be generated in situ by the collision of dense
  counter-propagating flows. <BR /> Aims: In this theoretical study, we
  analyse the mechanism that triggers the propagation of kink and sausage
  modes in the solar corona following the collision of counter-propagating
  flows, and how the properties of the flows affect the properties of
  the generated waves. <BR /> Methods: To study in detail this mechanism
  we ran a series of ideal 2D and 3D MHD simulations where we varied
  the properties of the counter-propagating flows; by means of a simple
  technique to estimate the amplitudes of the kink and sausage modes,
  we investigated their role in the generation and propagation of the
  MHD waves. <BR /> Results: We find that the amplitude of the waves is
  largely dependent on the kinetic energy of the flows, and that the
  onset of kink or sausage modes depends on the asymmetries between
  the colliding blobs. Moreover, the initial wavelength of the MHD
  waves is associated with the magnetic configuration resulting from
  the collision of the flows. We also find that genuine 3D systems
  respond with smaller wave amplitudes. <BR /> Conclusions: In this
  study, we present a parameter space description of the mechanism that
  leads to the generation of MHD waves from the collision of flows
  in the corona. Future observations of these waves can be used to
  understand the properties of the plasma and magnetic field of the solar
  corona. <P />The movies associated to Figs. 2 and 21 are available at <A
  href="https://www.aanda.org/10.1051/0004-6361/201935539/olm">https://www.aanda.org</A>

---------------------------------------------------------
Title: The effects of numerical resolution, heating timescales and
    background heating on thermal non-equilibrium in coronal loops
Authors: Johnston, C. D.; Cargill, P. J.; Antolin, P.; Hood, A. W.;
   De Moortel, I.; Bradshaw, S. J.
2019A&A...625A.149J    Altcode: 2019arXiv190407287J
  Thermal non-equilibrium (TNE) is believed to be a potentially important
  process in understanding some properties of the magnetically closed
  solar corona. Through one-dimensional hydrodynamic models, this paper
  addresses the importance of the numerical spatial resolution, footpoint
  heating timescales and background heating on TNE. Inadequate transition
  region (TR) resolution can lead to significant discrepancies in TNE
  cycle behaviour, with TNE being suppressed in under-resolved loops. A
  convergence on the periodicity and plasma properties associated with
  TNE required spatial resolutions of less than 2 km for a loop of length
  180 Mm. These numerical problems can be resolved using an approximate
  method that models the TR as a discontinuity using a jump condition, as
  proposed by Johnston et al. (2017a, A&amp;A, 597, A81; 2017b, A&amp;A,
  605, A8). The resolution requirements (and so computational cost)
  are greatly reduced while retaining good agreement with fully resolved
  results. Using this approximate method we (i) identify different regimes
  for the response of coronal loops to time-dependent footpoint heating
  including one where TNE does not arise and (ii) demonstrate that TNE
  in a loop with footpoint heating is suppressed unless the background
  heating is sufficiently small. The implications for the generality of
  TNE are discussed.

---------------------------------------------------------
Title: Phase mixing of nonlinear Alfvén waves
Authors: Prokopyszyn, A. P. K.; Hood, A. W.; De Moortel, I.
2019A&A...624A..90P    Altcode: 2019arXiv190308093P
  <BR /> Aims: This paper presents 2.5D numerical experiments of Alfvén
  wave phase mixing and aims to assess the effects of nonlinearities on
  wave behaviour and dissipation. In addition, this paper aims to quantify
  how effective the model presented in this work is at providing energy to
  the coronal volume. <BR /> Methods: The model is presented and explored
  through the use of several numerical experiments which were carried out
  using the Lare2D code. The experiments study footpoint driven Alfvén
  waves in the neighbourhood of a two-dimensional x-type null point with
  initially uniform density and plasma pressure. A continuous sinusoidal
  driver with a constant frequency is used. Each experiment uses different
  driver amplitudes to compare weakly nonlinear experiments with linear
  experiments. <BR /> Results: We find that the wave trains phase-mix
  owing to variations in the length of each field line and variations
  in the field strength. The nonlinearities reduce the amount of energy
  entering the domain, as they reduce the effectiveness of the driver,
  but they have relatively little effect on the damping rate (for the
  range of amplitudes studied). The nonlinearities produce density
  structures which change the natural frequencies of the field lines
  and hence cause the resonant locations to move. The shifting of the
  resonant location causes the Poynting flux associated with the driver
  to decrease. Reducing the magnetic diffusivity increases the energy
  build-up on the resonant field lines, however, it has little effect
  on the total amount of energy entering the system. From an order of
  magnitude estimate, we show that the Poynting flux in our experiments is
  comparable to the energy requirements of the quiet Sun corona. However
  a (possibly unphysically) large amount of magnetic diffusion was used
  however and it remains unclear if the model is able to provide enough
  energy under actual coronal conditions.

---------------------------------------------------------
Title: Contribution of observed multi frequency spectrum of Alfvén
    waves to coronal heating
Authors: Pagano, P.; De Moortel, I.
2019A&A...623A..37P    Altcode: 2019arXiv190102310P
  Context. Whilst there are observational indications that transverse
  magnetohydrodynamic (MHD) waves carry enough energy to maintain
  the thermal structure of the solar corona, it is not clear whether
  such energy can be efficiently and effectively converted into
  heating. Phase-mixing of Alfvén waves is considered a candidate
  mechanism, as it can develop transverse gradient where magnetic energy
  can be converted into thermal energy. However, phase-mixing is a process
  that crucially depends on the amplitude and period of the transverse
  oscillations, and only recently have we obtained a complete measurement
  of the power spectrum for transverse oscillations in the corona. <BR />
  Aims: We aim to investigate the heating generated by phase-mixing of
  transverse oscillations triggered by buffeting of a coronal loop that
  follows from the observed coronal power spectrum as well as the impact
  of these persistent oscillations on the structure of coronal loops. <BR
  /> Methods: We considered a 3D MHD model of an active region coronal
  loop and we perturbed its footpoints with a 2D horizontal driver that
  represents a random buffeting motion of the loop footpoints. Our driver
  was composed of 1000 pulses superimposed to generate the observed
  power spectrum. <BR /> Results: We find that the heating supply from
  the observed power spectrum in the solar corona through phase-mixing
  is not sufficient to maintain the million-degree active region
  solar corona. We also find that the development of Kelvin-Helmholtz
  instabilities could be a common phenomenon in coronal loops that
  could affect their apparent life time. <BR /> Conclusions: This study
  concludes that is unlikely that phase-mixing of Alfvén waves resulting
  from an observed power spectrum of transverse coronal loop oscillations
  can heat the active region solar corona. However, transverse waves could
  play an important role in the development of small scale structures. <P
  />Movies associated to Figs. 12, 13, 15, 18, and 19 are available at <A
  href="https://www.aanda.org/10.1051/0004-6361/201834158/olm">https://www.aanda.org</A>

---------------------------------------------------------
Title: Heating Effects from Driven Transverse and Alfvén Waves in
    Coronal Loops
Authors: Guo, Mingzhe; Van Doorsselaere, Tom; Karampelas, Konstantinos;
   Li, Bo; Antolin, Patrick; De Moortel, Ineke
2019ApJ...870...55G    Altcode: 2018arXiv181107608G
  Recent numerical studies revealed that transverse motions of coronal
  loops can induce the Kelvin-Helmholtz instability (KHI). This process
  could be important in coronal heating because it leads to dissipation
  of energy at small spatial scale plasma interactions. Meanwhile,
  small-amplitude decayless oscillations in coronal loops have
  been discovered recently in observations of SDO/AIA. We model
  such oscillations in coronal loops and study wave heating effects,
  considering a kink and Alfvén driver separately and a mixed driver at
  the bottom of flux tubes. Both the transverse and Alfvén oscillations
  can lead to the KHI. Meanwhile, the Alfvén oscillations established
  in loops will experience phase mixing. Both processes will generate
  small spatial scale structures, which can help the dissipation of
  wave energy. Indeed, we observe the increase of internal energy and
  temperature in loop regions. The heating is more pronounced for the
  simulation containing the mixed kink and Alfvén driver. This means that
  the mixed wave modes can lead to a more efficient energy dissipation
  in the turbulent state of the plasma and that the KHI eddies act as an
  agent to dissipate energy in other wave modes. Furthermore, we also
  obtained forward-modeling results using the FoMo code. We obtained
  forward models that are very similar to the observations of decayless
  oscillations. Due to the limited resolution of instruments, neither
  Alfvén modes nor the fine structures are observable. Therefore,
  this numerical study shows that Alfvén modes probably can coexist
  with kink modes, leading to enhanced heating.

---------------------------------------------------------
Title: Contribution of phase-mixing of Alfvén waves to coronal
    heating in multi-harmonic loop oscillations
Authors: Pagano, P.; Pascoe, D. J.; De Moortel, I.
2018A&A...616A.125P    Altcode: 2018arXiv180410562P
  Context. Kink oscillations of a coronal loop are observed and studied in
  detail because they provide a unique probe into the structure of coronal
  loops through magnetohydrodynamics (MHD) seismology and a potential
  test of coronal heating through the phase mixing of Alfvén waves. In
  particular, recent observations show that standing oscillations of loops
  often involve higher harmonics in addition to the fundamental mode. The
  damping of these kink oscillations is explained by mode coupling
  with Alfvén waves. <BR /> Aims: We investigate the consequences
  for wave-based coronal heating of higher harmonics and which coronal
  heating observational signatures we may use to infer the presence of
  higher harmonic kink oscillations. <BR /> Methods: We performed a set
  of non-ideal MHD simulations in which we modelled the damping of the
  kink oscillation of a flux tube via mode coupling. We based our MHD
  simulation parameters on the seismological inversion of an observation
  for which the first three harmonics are detected. We studied the phase
  mixing of Alfvén waves, which leads to the deposition of heat in the
  system, and we applied seismological inversion techniques to the MHD
  simulation output. <BR /> Results: We find that the heating due to phase
  mixing of Alfvén waves triggered by the damping of kink oscillation
  is relatively small. We can however illustrate how the heating location
  drifts from subsequent damping of lower order harmonics. We also address
  the role of higher order harmonics and the width of the boundary shell
  in the energy deposition. <BR /> Conclusions: We conclude that the
  coronal heating due to phase mixing does not seem to provide enough
  energy to maintain the thermal structure of the solar corona even when
  multi-harmonic oscillations are included; these oscillations play an
  inhibiting role in the development of smaller scale structures.

---------------------------------------------------------
Title: Reconnection Microjets in the Solar Corona
Authors: Antolin, Patrick; Pagano, Paolo; De Moortel, Ineke
2018cosp...42E..96A    Altcode:
  Coronal rain is one of the highest resolution tracers of the coronal
  magnetic field. In this work the dynamics of a prominence/coronal rain
  complex are analysed based on spectroscopic and imaging observations
  with IRIS, Hinode/SOT and SDO/AIA. The loop-like magnetic field arcade
  hosting the rain is observed to slowly expand in height. Prior and
  especially during this movement, several ( 100) small ( 1 arcsec)
  and short (&lt;20 sec) bursts of plasma perpendicular to the loop
  arcade are captured in the Si IV and Mg II lines. The line profiles are
  broad and asymmetric with long tails above 100 km/s. These microjets
  are accompanied with strong intensity enhancements co-spatially and
  along the loop in most of the AIA channels, indicating significant
  energy release increasing the temperature to several MK. Some events
  generate transverse MHD waves and the strongest events are accompanied
  by ejection of plasmoid-like structures. We interpret these microjets as
  magnetic reconnection outflows, produced by component reconnection in a
  strong guide field. The originally cold conditions of the rain allows,
  in this case, a unique high resolution glance into the reconnection
  dynamics in low beta plasmas, and marks the X-target in the Sun for
  next-generation telescopes.

---------------------------------------------------------
Title: In Situ Generation of Transverse Magnetohydrodynamic Waves
    from Colliding Flows in the Solar Corona
Authors: Antolin, Patrick; Pagano, Paolo; De Moortel, Ineke;
   Nakariakov, Valery M.
2018ApJ...861L..15A    Altcode: 2018arXiv180700395A
  Transverse magnetohydrodynamic (MHD) waves permeate the solar
  atmosphere and are a candidate for coronal heating. However, the
  origin of these waves is still unclear. In this Letter, we analyze
  coordinated observations from Hinode/Solar Optical Telescope (SOT) and
  Interface Region Imaging Spectrograph ( IRIS) of a prominence/coronal
  rain loop-like structure at the limb of the Sun. Cool and dense
  downflows and upflows are observed along the structure. A collision
  between a downward and an upward flow with an estimated energy flux
  of 10<SUP>7</SUP>-10<SUP>8</SUP> erg cm<SUP>-2</SUP> s<SUP>-1</SUP>
  is observed to generate oscillatory transverse perturbations of the
  strands with an estimated ≈40 km s<SUP>-1</SUP> total amplitude, and
  a short-lived brightening event with the plasma temperature increasing
  to at least 10<SUP>5</SUP> K. We interpret this response as sausage
  and kink transverse MHD waves based on 2D MHD simulations of plasma
  flow collision. The lengths, density, and velocity differences between
  the colliding clumps and the strength of the magnetic field are major
  parameters defining the response to the collision. The presence of
  asymmetry between the clumps (angle of impact surface and/or offset
  of flowing axis) is crucial for generating a kink mode. Using the
  observed values, we successfully reproduce the observed transverse
  perturbations and brightening, and show adiabatic heating to coronal
  temperatures. The numerical modeling indicates that the plasma β
  in this loop-like structure is confined between 0.09 and 0.36. These
  results suggest that such collisions from counter-streaming flows can
  be a source of in situ transverse MHD waves, and that for cool and dense
  prominence conditions such waves could have significant amplitudes.

---------------------------------------------------------
Title: Impact of Type II Spicules in the Corona: Simulations and
    Synthetic Observables
Authors: Martínez-Sykora, Juan; De Pontieu, Bart; De Moortel, Ineke;
   Hansteen, Viggo H.; Carlsson, Mats
2018ApJ...860..116M    Altcode: 2018arXiv180506475M
  The role of type II spicules in the corona has been a much debated topic
  in recent years. This paper aims to shed light on the impact of type
  II spicules in the corona using novel 2.5D radiative MHD simulations,
  including ion-neutral interaction effects with the Bifrost code. We
  find that the formation of simulated type II spicules, driven by
  the release of magnetic tension, impacts the corona in various
  manners. Associated with the formation of spicules, the corona
  exhibits (1) magneto-acoustic shocks and flows, which supply mass
  to coronal loops, and (2) transversal magnetic waves and electric
  currents that propagate at Alfvén speeds. The transversal waves and
  electric currents, generated by the spicule’s driver and lasting
  for many minutes, are dissipated and heat the associated loop. These
  complex interactions in the corona can be connected with blueshifted
  secondary components in coronal spectral lines (red-blue asymmetries)
  observed with Hinode/EIS and SOHO/SUMER, as well as the EUV counterpart
  of type II spicules and propagating coronal disturbances observed with
  the 171 Å and 193 Å SDO/AIA channels.

---------------------------------------------------------
Title: Transverse Wave Induced Kelvin-Helmholtz Rolls in Spicules
Authors: Antolin, P.; Schmit, D.; Pereira, T. M. D.; De Pontieu, B.;
   De Moortel, I.
2018ApJ...856...44A    Altcode: 2018arXiv180300821A
  In addition to their jet-like dynamic behavior, spicules usually exhibit
  strong transverse speeds, multi-stranded structure, and heating from
  chromospheric to transition region temperatures. In this work we first
  analyze Hinode and IRIS observations of spicules and find different
  behaviors in terms of their Doppler velocity evolution and collective
  motion of their sub-structure. Some have a Doppler shift sign change
  that is rather fixed along the spicule axis, and lack coherence in
  the oscillatory motion of strand-like structure, matching rotation
  models, or long-wavelength torsional Alfvén waves. Others exhibit a
  Doppler shift sign change at maximum displacement and coherent motion
  of their strands, suggesting a collective magnetohydrodynamic (MHD)
  wave. By comparing with an idealized 3D MHD simulation combined with
  radiative transfer modeling, we analyze the role of transverse MHD
  waves and associated instabilities in spicule-like features. We find
  that transverse wave induced Kelvin-Helmholtz (TWIKH) rolls lead to
  coherence of strand-like structure in imaging and spectral maps, as seen
  in some observations. The rapid transverse dynamics and the density
  and temperature gradients at the spicule boundary lead to ring-shaped
  Mg II k and Ca II H source functions in the transverse cross-section,
  potentially allowing IRIS to capture the Kelvin-Helmholtz instability
  dynamics. Twists and currents propagate along the spicule at Alfvénic
  speeds, and the temperature variations within TWIKH rolls, produce the
  sudden appearance/disappearance of strands seen in Doppler velocity
  and in Ca II H intensity. However, only a mild intensity increase in
  higher-temperature lines is obtained, suggesting there is an additional
  heating mechanism at work in spicules.

---------------------------------------------------------
Title: Observations and Modeling of Transition Region and Coronal
    Heating Associated with Spicules
Authors: De Pontieu, B.; Martinez-Sykora, J.; De Moortel, I.;
   Chintzoglou, G.; McIntosh, S. W.
2017AGUFMSH43A2793D    Altcode:
  Spicules have been proposed as significant contributorsto the coronal
  energy and mass balance. While previous observationshave provided
  a glimpse of short-lived transient brightenings in thecorona that
  are associated with spicules, these observations have beencontested
  and are the subject of a vigorous debate both on the modelingand
  the observational side so that it remains unclear whether plasmais
  heated to coronal temperatures in association with spicules. We use
  high-resolution observations of the chromosphere and transition region
  with the Interface Region Imaging Spectrograph (IRIS) and ofthe corona
  with the Atmospheric Imaging Assembly (AIA) onboard theSolar Dynamics
  Observatory (SDO) to show evidence of the formation of coronal
  structures as a result of spicular mass ejections andheating of
  plasma to transition region and coronaltemperatures. Our observations
  suggest that a significant fraction of the highly dynamic loop fan
  environment associated with plage regions may be the result of the
  formation of such new coronal strands, a process that previously had
  been interpreted as the propagation of transient propagating coronal
  disturbances (PCD)s. Our observationsare supported by 2.5D radiative
  MHD simulations that show heating tocoronal temperatures in association
  with spicules. Our results suggest that heating and strong flows play
  an important role in maintaining the substructure of loop fans, in
  addition to the waves that permeate this low coronal environment. Our
  models also matches observations ofTR counterparts of spicules and
  provides an elegant explanation forthe high apparent speeds of these
  "network jets".

---------------------------------------------------------
Title: Energetics of the Kelvin-Helmholtz instability induced by
    transverse waves in twisted coronal loops
Authors: Howson, T. A.; De Moortel, I.; Antolin, P.
2017A&A...607A..77H    Altcode: 2017arXiv170804124H
  <BR /> Aims: We quantify the effects of twisted magnetic fields on
  the development of the magnetic Kelvin-Helmholtz instability (KHI) in
  transversely oscillating coronal loops. <BR /> Methods: We modelled a
  fundamental standing kink mode in a straight, density-enhanced magnetic
  flux tube using the magnetohydrodynamics code, Lare3d. In order to
  evaluate the impact of an azimuthal component of the magnetic field,
  various degrees of twist were included within the flux tube's magnetic
  field. <BR /> Results: The process of resonant absorption is only
  weakly affected by the presence of a twisted magnetic field. However,
  the subsequent evolution of the KHI is sensitive to the strength of the
  azimuthal component of the field. Increased twist values inhibit the
  deformation of the loop's density profile, which is associated with
  the growth of the instability. Despite this, much smaller scales in
  the magnetic field are generated when there is a non-zero azimuthal
  component present. Hence, the instability is more energetic in cases
  with (even weakly) twisted fields. Field aligned flows at the loop
  apex are established in a twisted regime once the instability has
  formed. Further, in the straight field case, there is no net vertical
  component of vorticity when integrated across the loop. However, the
  inclusion of azimuthal magnetic field generates a preferred direction
  for the vorticity which oscillates during the kink mode. <BR />
  Conclusions: The KHI may have implications for wave heating in the
  solar atmosphere due to the creation of small length scales and the
  generation of a turbulent regime. Whilst magnetic twist does suppress
  the development of the vortices associated with the instability, the
  formation of the KHI in a twisted regime will be accompanied by greater
  Ohmic dissipation due to the larger currents that are produced, even if
  only weak twist is present. The presence of magnetic twist will likely
  make the instability more difficult to detect in the corona, but will
  enhance its contribution to heating the solar atmosphere. Further,
  the development of velocities along the loop may have observational
  applications for inferring the presence of magnetic twist within
  coronal structures.

---------------------------------------------------------
Title: Above the Noise: The Search for Periodicities in the Inner
    Heliosphere
Authors: Threlfall, James; De Moortel, Ineke; Conlon, Thomas
2017SoPh..292..165T    Altcode:
  Remote sensing of coronal and heliospheric periodicities can provide
  vital insight into the local conditions and dynamics of the solar
  atmosphere. We seek to trace long (one hour or longer) periodic
  oscillatory signatures (previously identified above the limb in
  the corona by, e.g., Telloni et al. in Astrophys. J.767, 138, 2013)
  from their origin at the solar surface out into the heliosphere. To
  do this, we combined on-disk measurements taken by the Atmospheric
  Imaging Assembly (AIA) onboard the Solar Dynamics Observatory (SDO)
  and concurrent extreme ultra-violet (EUV) and coronagraph data
  from one of the Solar Terrestrial Relations Observatory (STEREO)
  spacecraft to study the evolution of two active regions in the
  vicinity of an equatorial coronal hole over several days in early
  2011. Fourier and wavelet analysis of signals were performed. Applying
  white-noise-based confidence levels to the power spectra associated
  with detrended intensity time series yields detections of oscillatory
  signatures with periods from 6 - 13 hours in both AIA and STEREO
  data. As was found by Telloni et al. (2013), these signatures are
  aligned with local magnetic structures. However, typical spectral
  power densities all vary substantially as a function of period,
  indicating spectra dominated by red (rather than white) noise. Contrary
  to the white-noise-based results, applying global confidence levels
  based on a generic background-noise model (allowing a combination of
  white noise, red noise, and transients following Auchère et al. in
  Astrophys. J.825, 110, 2016) without detrending the time series uncovers
  only sporadic, spatially uncorrelated evidence of periodic signatures
  in either instrument. Automating this method to individual pixels in
  the STEREO/COR coronagraph field of view is non-trivial. Efforts to
  identify and implement a more robust automatic background noise model
  fitting procedure are needed.

---------------------------------------------------------
Title: Observations and Numerical Models of Solar Coronal Heating
    Associated with Spicules
Authors: De Pontieu, B.; De Moortel, I.; Martinez-Sykora, J.; McIntosh,
   S. W.
2017ApJ...845L..18D    Altcode: 2017arXiv171006790D
  Spicules have been proposed as significant contributors to the mass
  and energy balance of the corona. While previous observations have
  provided a glimpse of short-lived transient brightenings in the
  corona that are associated with spicules, these observations have
  been contested and are the subject of a vigorous debate both on the
  modeling and the observational side. Therefore, it remains unclear
  whether plasma is heated to coronal temperatures in association with
  spicules. We use high-resolution observations of the chromosphere and
  transition region (TR) with the Interface Region Imaging Spectrograph
  and of the corona with the Atmospheric Imaging Assembly on board
  the Solar Dynamics Observatory to show evidence of the formation
  of coronal structures associated with spicular mass ejections and
  heating of plasma to TR and coronal temperatures. Our observations
  suggest that a significant fraction of the highly dynamic loop fan
  environment associated with plage regions may be the result of the
  formation of such new coronal strands, a process that previously had
  been interpreted as the propagation of transient propagating coronal
  disturbances. Our observations are supported by 2.5D radiative MHD
  simulations that show heating to coronal temperatures in association
  with spicules. Our results suggest that heating and strong flows
  play an important role in maintaining the substructure of loop fans,
  in addition to the waves that permeate this low coronal environment.

---------------------------------------------------------
Title: A new approach for modelling chromospheric evaporation in
    response to enhanced coronal heating. II. Non-uniform heating
Authors: Johnston, C. D.; Hood, A. W.; Cargill, P. J.; De Moortel, I.
2017A&A...605A...8J    Altcode: 2017arXiv170504054J
  We proposed that the use of an approximate "jump condition" at the
  solar transition region permits fast and accurate numerical solutions
  of the one dimensional hydrodynamic equations when the corona undergoes
  impulsive heating. In particular, it eliminates the need for the very
  short timesteps imposed by a highly resolved numerical grid. This
  paper presents further examples of the applicability of the method
  for cases of non-uniform heating, in particular, nanoflare trains
  (uniform in space but non-uniform in time) and spatially localised
  impulsive heating, including at the loop apex and base of the transition
  region. In all cases the overall behaviour of the coronal density and
  temperature shows good agreement with a fully resolved one dimensional
  model and is significantly better than the equivalent results from a
  1D code run without using the jump condition but with the same coarse
  grid. A detailed assessment of the errors introduced by the jump
  condition is presented showing that the causes of discrepancy with the
  fully resolved code are (I) the neglect of the terms corresponding
  to the rate of change of total energy in the unresolved atmosphere;
  (II) mass motions at the base of the transition region and (III) for
  some cases with footpoint heating, an over-estimation of the radiative
  losses in the transition region.

---------------------------------------------------------
Title: The effects of resistivity and viscosity on the Kelvin-
    Helmholtz instability in oscillating coronal loops
Authors: Howson, T. A.; De Moortel, I.; Antolin, P.
2017A&A...602A..74H    Altcode: 2017arXiv170302423H
  <BR /> Aims: We investigate the effects of resistivity and viscosity
  on the onset and growth of the Kelvin-Helmholtz instability (KHI) in
  an oscillating coronal loop. <BR /> Methods: We modelled a standing
  kink wave in a density-enhanced loop with the three dimensional (3D),
  resistive magnetohydrodynamics code, Lare3d. We conducted a parameter
  study on the viscosity and resistivity coefficients to examine the
  effects of dissipation on the KHI. <BR /> Results: Enhancing the
  viscosity (ν) and resistivity (η) acts to suppress the KHI. Larger
  values of η and ν delay the formation of the instability and, in some
  cases, prevent the onset completely. This leads to the earlier onset
  of heating for smaller values of the transport coefficients. We note
  that viscosity has a greater effect on the development of the KHI than
  resistivity. Furthermore, when using anomalous resistivity, the Ohmic
  heating rate associated with the KHI may be greater than that associated
  with the phase mixing that occurs in an instability-suppressed regime
  (using uniform resistivity). <BR /> Conclusions: From our study, it is
  clear that the heating rate crucially depends on the formation of small
  length scales (influenced by the numerical resolution) as well as the
  values of resistivity and viscosity. As larger values of the transport
  coefficients suppress the KHI, the onset of heating is delayed but
  the heating rate is larger. As increased numerical resolution allows
  smaller length scales to develop, the heating rate will be higher even
  for the same values of η and ν.

---------------------------------------------------------
Title: Contribution of mode-coupling and phase-mixing of Alfvén
    waves to coronal heating
Authors: Pagano, P.; De Moortel, I.
2017A&A...601A.107P    Altcode:
  Context. Phase-mixing of Alfvén waves in the solar corona has been
  identified as one possible candidate to explain coronal heating. While
  this scenario is supported by observations of ubiquitous oscillations
  in the corona carrying sufficient wave energy and by theoretical
  models that have described the concentration of energy in small-scale
  structures, it is still unclear whether this wave energy can be
  converted into thermal energy in order to maintain the million-degree
  hot solar corona. <BR /> Aims: The aim of this work is to assess how
  much energy can be converted into thermal energy by a phase-mixing
  process triggered by the propagation of Alfvénic waves in a cylindric
  coronal structure, such as a coronal loop, and to estimate the impact
  of this conversion on the coronal heating and thermal structure
  of the solar corona. <BR /> Methods: To this end, we ran 3D MHD
  simulations of a magnetised cylinder where the Alfvén speed varies
  through a boundary shell, and a footpoint driver is set to trigger
  kink modes that mode couple to torsional Alfvén modes in the boundary
  shell. These Alfvén waves are expected to phase-mix, and the system
  allows us to study the subsequent thermal energy deposition. We ran a
  reference simulation to explain the main process and then we varied
  the simulation parameters, such as the size of the boundary shell,
  its structure, and the persistence of the driver. <BR /> Results:
  When we take high values of magnetic resistivity and strong footpoint
  drivers into consideration, we find that I) phase-mixing leads to
  a temperature increase of the order of 10<SUP>5</SUP> K or less,
  depending on the structure of the boundary shell; II) this energy
  is able to balance the radiative losses only in the localised region
  involved in the heating; and III) we can determine the influence of
  the boundary layer and the persistence of the driver on the thermal
  structure of the system. <BR /> Conclusions: Our conclusion is that as
  a result of the extreme physical parameters we adopted and the moderate
  impact on the heating of the system, it is unlikely that phase-mixing
  can contribute on a global scale to the heating of the solar corona.

---------------------------------------------------------
Title: Contribution of mode coupling and phase-mixing of Alfvén
    waves to coronal heating
Authors: Pagano, Paolo; De Moortel, Ineke
2017EGUGA..19.9255P    Altcode: 2017arXiv170305707P
  The solar corona is a million degree plasma that has been investigated
  for long time to understand the cause of this high heating rate. In
  particular, phase-mixing of Alfvén waves in the solar corona has
  been identified as one possible candidate to explain coronal heating
  by observations of ubiquitous oscillations in the corona carrying
  sufficient wave energy and by theoretical models that have described
  the concentration of energy in small scale structures. The aim of
  this work is to assess how much energy can be converted into thermal
  energy by a phase-mixing process triggered by the propagation of
  Alfvénic waves in a cylindric coronal structure, such as a coronal
  loop, and to estimate the impact of this conversion on the coronal
  heating and thermal structure of the solar corona plasma. We run 3D
  MHD simulations of a magnetised cylinder where the Alfvén speed varies
  through a boundary shell and a footpoint driver is set to trigger kink
  modes which mode couple to torsional Alfvén modes in the boundary
  shell. These Alfvén waves are expected to phase-mix and the system
  allows us to study the following thermal energy deposition on the
  plasma. We run a reference simulation to explain the main process and
  then we vary simulation parameters, such as the size of the boundary
  shell, its structure and the persistence of the driver. Taking into
  consideration high values of magnetic resistivity and strong footpoint
  drivers, we find i) that phase-mixing leads to a temperature increase,
  ii) that this energy is able to balance the radiative losses only in
  the localised region involved in the heating.

---------------------------------------------------------
Title: Observational Signatures of Transverse Magnetohydrodynamic
    Waves and Associated Dynamic Instabilities in Coronal Flux Tubes
Authors: Antolin, P.; De Moortel, I.; Van Doorsselaere, T.; Yokoyama,
   T.
2017ApJ...836..219A    Altcode:
  Magnetohydrodynamic (MHD) waves permeate the solar atmosphere
  and constitute potential coronal heating agents. Yet, the waves
  detected so far may be but a small subset of the true existing wave
  power. Detection is limited by instrumental constraints but also by
  wave processes that localize the wave power in undetectable spatial
  scales. In this study, we conduct 3D MHD simulations and forward
  modeling of standing transverse MHD waves in coronal loops with
  uniform and non-uniform temperature variation in the perpendicular
  cross-section. The observed signatures are largely dominated by the
  combination of the Kelvin-Helmholtz instability (KHI), resonant
  absorption, and phase mixing. In the presence of a cross-loop
  temperature gradient, we find that emission lines sensitive to the
  loop core catch different signatures compared to those that are more
  sensitive to the loop boundary and the surrounding corona, leading to
  an out-of-phase intensity and Doppler velocity modulation produced by
  KHI mixing. In all of the considered models, common signatures include
  an intensity and loop width modulation at half the kink period, a fine
  strand-like structure, a characteristic arrow-shaped structure in the
  Doppler maps, and overall line broadening in time but particularly at
  the loop edges. For our model, most of these features can be captured
  with a spatial resolution of 0.″33 and a spectral resolution of 25
  km s<SUP>-1</SUP>, although we do obtain severe over-estimation of
  the line width. Resonant absorption leads to a significant decrease
  of the observed kinetic energy from Doppler motions over time, which
  is not recovered by a corresponding increase in the line width from
  phase mixing and KHI motions. We estimate this hidden wave energy to
  be a factor of 5-10 of the observed value.

---------------------------------------------------------
Title: Observational signatures of transverse MHD waves and associated
    dynamic instabilities
Authors: Antolin, Patrick; De Moortel, Ineke; Van Doorsselaere, Tom;
   Yokoyama, Takaaki
2017arXiv170200775A    Altcode:
  MHD waves permeate the solar atmosphere and constitute potential
  coronal heating agents. Yet, the waves detected so far may be but a
  small subset of the true existing wave power. Detection is limited by
  instrumental constraints, but also by wave processes that localise the
  wave power in undetectable spatial scales. In this study we conduct 3D
  MHD simulations and forward modelling of standing transverse MHD waves
  in coronal loops with uniform and non-uniform temperature variation in
  the perpendicular cross-section. The observed signatures are largely
  dominated by the combination of the Kelvin-Helmholtz instability (KHI),
  resonant absorption and phase mixing. In the presence of a cross-loop
  temperature gradient we find that emission lines sensitive to the
  loop core catch different signatures than those more sensitive to the
  loop boundary and the surrounding corona, leading to an out-of-phase
  intensity modulation produced by the KHI mixing. Common signatures to
  all considered models include an intensity and loop width modulation
  at half the kink period, fine strand-like structure, a characteristic
  arrow-shaped structure in the Doppler maps, overall line broadening in
  time but particularly at the loop edges. For our model, most of these
  features can be captured with a spatial resolution of $0.33\arcsec$ and
  spectral resolution of 25~km~s$^{-1}$, although severe over-estimation
  of the line width is obtained. Resonant absorption leads to a
  significant decrease of the observed kinetic energy from Doppler
  motions over time, which is not recovered by a corresponding increase
  in the line width from phase mixing and the KHI motions. We estimate
  this hidden wave energy to be a factor of $5-10$ of the observed value.

---------------------------------------------------------
Title: JPEG2000 Image Compression on Solar EUV Images
Authors: Fischer, Catherine E.; Müller, Daniel; De Moortel, Ineke
2017SoPh..292...16F    Altcode: 2017arXiv170201946F
  For future solar missions as well as ground-based telescopes,
  efficient ways to return and process data have become increasingly
  important. Solar Orbiter, which is the next ESA/NASA mission to explore
  the Sun and the heliosphere, is a deep-space mission, which implies a
  limited telemetry rate that makes efficient onboard data compression
  a necessity to achieve the mission science goals. Missions like the
  Solar Dynamics Observatory (SDO) and future ground-based telescopes
  such as the Daniel K. Inouye Solar Telescope, on the other hand, face
  the challenge of making petabyte-sized solar data archives accessible
  to the solar community. New image compression standards address
  these challenges by implementing efficient and flexible compression
  algorithms that can be tailored to user requirements. We analyse solar
  images from the Atmospheric Imaging Assembly (AIA) instrument onboard
  SDO to study the effect of lossy JPEG2000 (from the Joint Photographic
  Experts Group 2000) image compression at different bitrates. To assess
  the quality of compressed images, we use the mean structural similarity
  (MSSIM) index as well as the widely used peak signal-to-noise ratio
  (PSNR) as metrics and compare the two in the context of solar EUV
  images. In addition, we perform tests to validate the scientific use
  of the lossily compressed images by analysing examples of an on-disc
  and off-limb coronal-loop oscillation time-series observed by AIA/SDO.

---------------------------------------------------------
Title: Sub-photosphere to Solar Atmosphere Connection
Authors: Komm, Rudolf; De Moortel, Ineke; Fan, Yuhong; Ilonidis,
   Stathis; Steiner, Oskar
2017hdsi.book..173K    Altcode:
  No abstract at ADS

---------------------------------------------------------
Title: A new approach for modelling chromospheric evaporation in
    response to enhanced coronal heating. I. The method
Authors: Johnston, C. D.; Hood, A. W.; Cargill, P. J.; De Moortel, I.
2017A&A...597A..81J    Altcode: 2016arXiv160905075J
  We present a new computational approach that addresses the difficulty
  of obtaining the correct interaction between the solar corona and
  the transition region, in response to rapid heating events. In
  the coupled corona, transition region, and chromosphere system, an
  enhanced downward conductive flux results in an upflow (chromospheric
  evaporation). However, obtaining the correct upflow generally requires
  high spatial resolution in order to resolve the transition region. With
  an unresolved transition region, artificially low coronal densities are
  obtained because the downward heat flux "jumps" across the unresolved
  region to the chromosphere, underestimating the upflows. Here, we treat
  the lower transition region as a discontinuity that responds to changing
  coronal conditions through the imposition of a jump condition that is
  derived from an integrated form of energy conservation. To illustrate
  and benchmark this approach against a fully resolved one-dimensional
  model, we present field-aligned simulations of coronal loops in response
  to a range of impulsive (spatially uniform) heating events. We show that
  our approach leads to a significant improvement in the coronal density
  evolution than just when using coarse spatial resolutions insufficient
  to resolve the lower transition region. Our approach compensates for the
  jumping of the heat flux by imposing a velocity correction that ensures
  that the energy from the heat flux goes into driving the transition
  region dynamics, rather than being lost through radiation. Hence,
  it is possible to obtain improved coronal densities. The advantages
  of using this approach in both one-dimensional hydrodynamic and
  three-dimensional magnetohydrodynamic simulations are discussed.

---------------------------------------------------------
Title: IRIS and SDO observations of coronal heating associated
    with spicules
Authors: De Moortel, Ineke
2017psio.confE..55D    Altcode:
  No abstract at ADS

---------------------------------------------------------
Title: Reconnection Microjets in the Pre-eruption Phase of a
    Prominence/Coronal Rain Complex
Authors: Antolin, P.; Mehta, T.; Conlon, T.; De Moortel, I.
2016AGUFMSH43C2582A    Altcode:
  Coronal rain is known to be one of the highest resolution tracers
  of the coronal magnetic field. In this work the dynamics of a
  prominence/coronal rain complex are analysed based on imaging and
  spectroscopic observations with IRIS. Prior to eruption, the loop-like
  magnetic field arcade hosting the rain is observed to slowly expand
  in height. This movement is accompanied by several small ( 1 arsec)
  and short (&lt;20 sec) bursts of plasma perpendicular to the field,
  captured in the Si IV and Mg II lines. The line profiles are broad
  and asymmetric with long tails above 100 km/s. These microjets are
  accompanied with strong intensity enhancements along the loop in most of
  the AIA channels, indicating significant energy release. We interpret
  these microjets as reconnection outflows, produced by component
  reconnection as the magnetic structure expands transversely. The
  originally cold conditions of the rain allows in this case a unique
  high resolution glance at the reconnection dynamics in low beta plasmas.

---------------------------------------------------------
Title: IRIS and SDO/AIA observations of coronal heating associated
    with spicules
Authors: De Pontieu, B.; De Moortel, I.; Mcintosh, S. W.
2016AGUFMSH42B..07D    Altcode:
  Chromospheric spicules have been proposed as significant contributors
  to the coronal energy and mass balance. While previous observations
  have provided a glimpse of short-lived transient brightenings in
  the corona that are associated with spicules, these observations
  have been contested and the subject of a vigorous debate both on the
  modeling and the observational side so that it remains unclear whether
  plasma associated with spicules is heated to coronal temperatures. We
  use high-resolution observations of the chromosphere and transition
  region with the Interface Region Imaging Spectrograph (IRIS) and of
  the corona with the Atmospheric Imaging Assembly (AIA) onboard the
  Solar Dynamics Observatory (SDO) to show evidence of the formation of
  coronal structures as a result of spicular mass ejections and subsequent
  heating of plasma first to transition region and later to coronal
  temperatures. Our observations suggest that much of the highly dynamic
  loop fan environment associated with plage regions may be the result
  of the formation of such new coronal strands, a process that previously
  had been interpreted as the propagation of transient propagating coronal
  disturbances (PCD)s. Our results suggest that heating and strong flows
  play an important role in maintaining the substructure of loop fans,
  in addition to the waves that permeate this low coronal environment.

---------------------------------------------------------
Title: Impact of flux distribution on elementary heating events
Authors: O'Hara, J. P.; De Moortel, I.
2016A&A...594A..67O    Altcode:
  Context. The complex magnetic field on the solar surface has been
  shown to contain a range of sizes and distributions of magnetic
  flux structures. The dynamic evolution of this magnetic carpet by
  photospheric flows provides a continual source of free magnetic
  energy into the solar atmosphere, which can subsequently be released
  by magnetic reconnection. <BR /> Aims: We investigate how the
  distribution and number of magnetic flux sources impact the energy
  release and locations of heating through magnetic reconnection driven
  by slow footpoint motions. <BR /> Methods: 3D magnetohydrodynamic
  (MHD) simulations using Lare3D are carried out, where flux tubes are
  formed between positive and negative sources placed symmetrically on
  the lower and upper boundaries of the domain, respectively. The flux
  tubes are subjected to rotational driving velocities on the boundaries
  and are forced to interact and reconnect. <BR /> Results: Initially,
  simple flux distributions with two and four sources are compared. In
  both cases, central current concentrations are formed between the flux
  tubes and Ohmic heating occurs. The reconnection and subsequent energy
  release is delayed in the four-source case and is shown to produce
  more locations of heating, but with smaller magnitudes. Increasing the
  values of the background field between the flux tubes is shown to delay
  the onset of reconnection and increases the efficiency of heating in
  both the two- and four-source cases. The cases with two flux tubes are
  always more energetic than the corresponding four flux tube cases,
  however the addition of the background field makes this disparity
  less significant. A final experiment with a larger number of smaller
  flux sources is considered and the field evolution and energetics are
  shown to be remarkably similar to the two-source case, indicating the
  importance of the size and separation of the flux sources relative to
  the spatial scales of the velocity driver.

---------------------------------------------------------
Title: Modeling Observed Decay-less Oscillations as Resonantly
    Enhanced Kelvin-Helmholtz Vortices from Transverse MHD Waves and
    Their Seismological Application
Authors: Antolin, P.; De Moortel, I.; Van Doorsselaere, T.; Yokoyama,
   T.
2016ApJ...830L..22A    Altcode: 2016arXiv160909716A
  In the highly structured solar corona, resonant absorption is an
  unavoidable mechanism of energy transfer from global transverse MHD
  waves to local azimuthal Alfvén waves. Due to its localized nature,
  direct detection of this mechanism is extremely difficult. Yet, it is
  the leading theory explaining the observed fast damping of the global
  transverse waves. However, at odds with this theoretical prediction
  are recent observations that indicate that in the low-amplitude regime
  such transverse MHD waves can also appear decay-less, a still unsolved
  phenomenon. Recent numerical work has shown that Kelvin-Helmholtz
  instabilities (KHI) often accompany transverse MHD waves. In this work,
  we combine 3D MHD simulations and forward modeling to show that for
  currently achieved spatial resolution and observed small amplitudes,
  an apparent decay-less oscillation is obtained. This effect results
  from the combination of periodic brightenings produced by the KHI
  and the coherent motion of the KHI vortices amplified by resonant
  absorption. Such an effect is especially clear in emission lines forming
  at temperatures that capture the boundary dynamics rather than the core,
  and reflects the low damping character of the local azimuthal Alfvén
  waves resonantly coupled to the kink mode. Due to phase mixing, the
  detected period can vary depending on the emission line, with those
  sensitive to the boundary having shorter periods than those sensitive
  to the loop core. This allows us to estimate the density contrast at
  the boundary.

---------------------------------------------------------
Title: On the Connection between Propagating Solar Coronal
    Disturbances and Chromospheric Footpoints
Authors: Bryans, P.; McIntosh, S. W.; De Moortel, I.; De Pontieu, B.
2016ApJ...829L..18B    Altcode:
  The Interface Region Imaging Spectrograph (IRIS) provides an
  unparalleled opportunity to explore the (thermal) interface between the
  chromosphere, transition region, and the coronal plasma observed by the
  Atmospheric Imaging Assembly (AIA) of the Solar Dynamics Observatory
  (SDO). The SDO/AIA observations of coronal loop footpoints show
  strong recurring upward propagating signals—“propagating coronal
  disturbances” (PCDs) with apparent speeds of the order of 100-120 km
  s<SUP>-1</SUP>. That signal has a clear signature in the slit-jaw images
  of IRIS in addition to identifiable spectral signatures and diagnostics
  in the Mg iih (2803 Å) line. In analyzing the Mg iih line, we are able
  to observe the presence of magnetoacoustic shock waves that are also
  present in the vicinity of the coronal loop footpoints. We see there is
  enough of a correspondence between the shock propagation in Mg iih, the
  evolution of the Si IV line profiles, and the PCD evolution to indicate
  that these waves are an important ingredient for PCDs. In addition, the
  strong flows in the jet-like features in the IRIS Si IV slit-jaw images
  are also associated with PCDs, such that waves and flows both appear
  to be contributing to the signals observed at the footpoints of PCDs.

---------------------------------------------------------
Title: Coronal Density Structure and its Role in Wave Damping in Loops
Authors: Cargill, P. J.; De Moortel, I.; Kiddie, G.
2016ApJ...823...31C    Altcode:
  It has long been established that gradients in the Alfvén speed, and
  in particular the plasma density, are an essential part of the damping
  of waves in the magnetically closed solar corona by mechanisms such as
  resonant absorption and phase mixing. While models of wave damping often
  assume a fixed density gradient, in this paper the self-consistency
  of such calculations is assessed by examining the temporal evolution
  of the coronal density. It is shown conceptually that for some coronal
  structures, density gradients can evolve in a way that the wave-damping
  processes are inhibited. For the case of phase mixing we argue that
  (a) wave heating cannot sustain the assumed density structure and (b)
  inclusion of feedback of the heating on the density gradient can lead to
  a highly structured density, although on long timescales. In addition,
  transport coefficients well in excess of classical are required to
  maintain the observed coronal density. Hence, the heating of closed
  coronal structures by global oscillations may face problems arising from
  the assumption of a fixed density gradient, and the rapid damping of
  oscillations may have to be accompanied by a separate (non-wave-based)
  heating mechanism to sustain the required density structuring.

---------------------------------------------------------
Title: Transverse, propagating velocity perturbations in solar
    coronal loops
Authors: De Moortel, I.; Pascoe, D. J.; Wright, A. N.; Hood, A. W.
2016PPCF...58a4001D    Altcode: 2015arXiv151000976D
  As waves and oscillations carry both energy and information, they
  have enormous potential as a plasma heating mechanism and, through
  seismology, to provide estimates of local plasma properties which
  are hard to obtain from direct measurements. Being sufficiently near
  to allow high-resolution observations, the atmosphere of the Sun
  forms a natural plasma laboratory. Recent observations have revealed
  that an abundance of waves and oscillations is present in the solar
  atmosphere, leading to a renewed interest in wave heating mechanisms. <P
  />This short review paper gives an overview of recently observed
  transverse, propagating velocity perturbations in coronal loops. These
  ubiquitous perturbations are observed to undergo strong damping as
  they propagate. Using 3D numerical simulations of footpoint-driven
  transverse waves propagating in a coronal plasma with a cylindrical
  density structure, in combination with analytical modelling, it is
  demonstrated that the observed velocity perturbations can be understood
  in terms of coupling of different wave modes in the inhomogeneous
  boundaries of the loops. Mode coupling in the inhomogeneous boundary
  layers of the loops leads to the coupling of the transversal (kink) mode
  to the azimuthal (Alfvén) mode, observed as the decay of the transverse
  kink oscillations. Both the numerical and analytical results show the
  spatial profile of the damped wave has a Gaussian shape to begin with,
  before switching to exponential decay at large heights. In addition,
  recent analysis of CoMP (Coronal Multi-channel Polarimeter) Doppler
  shift observations of large, off-limb, trans-equatorial loops shows that
  Fourier power at the apex appears to be higher in the high-frequency
  part of the spectrum than expected from theoretical models. This excess
  high-frequency FFT power could be tentative evidence for the onset of
  a cascade of the low-to-mid frequency waves into (Alfvénic) turbulence.

---------------------------------------------------------
Title: Sub-photosphere to Solar Atmosphere Connection
Authors: Komm, Rudolf; De Moortel, Ineke; Fan, Yuhong; Ilonidis,
   Stathis; Steiner, Oskar
2015SSRv..196..167K    Altcode: 2013SSRv..tmp...93K
  Magnetic fields extend from the solar interior through the
  atmosphere. The formation and evolution of active regions can be studied
  by measuring subsurface flows with local helioseismology. The emergence
  of magnetic flux from the solar convection zone is associated with
  acoustic perturbation signatures. In near-surface layers, the average
  dynamics can be determined for emerging regions. MHD simulations
  of the emergence of a twisted flux tube show how magnetic twist
  and free energy are transported from the interior into the corona
  and the dynamic signatures associated with such transport in the
  photospheric and sub-photospheric layers. The subsurface twisted flux
  tube does not emerge into the corona as a whole in emerging active
  regions. Shear flows at the polarity inversion line and coherent
  vortical motions in the subsurface flux tubes are the major means by
  which twist is transported into the corona, leading to the formation
  of sigmoid-shaped coronal magnetic fields capable of driving solar
  eruptions. The transport of twist can be followed from the interior
  by using the kinetic helicity of subsurface flows as a proxy of
  magnetic helicity; this quantity holds great promise for improving
  the understanding of eruptive phenomena. Waves are not only vital for
  studying the link between the solar interior and the surface but for
  linking the photosphere with the corona as well. Acoustic waves that
  propagate from the surface into the magnetically structured, dynamic
  atmosphere undergo mode conversion and refraction. These effects
  enable atmospheric seismology to determine the topography of magnetic
  canopies in the solar atmosphere. Inclined magnetic fields lower
  the cut-off frequency so that low frequency waves can leak into the
  outer atmosphere. Recent high resolution, high cadence observations of
  waves and oscillations in the solar atmosphere, have lead to a renewed
  interest in the potential role of waves as a heating mechanism. In light
  of their potential contribution to the heating of the solar atmosphere,
  some of the recent observations of waves and oscillations and ongoing
  modelling efforts are reviewed.

---------------------------------------------------------
Title: Impact of Flux Distribution on Elementary Heating Events
Authors: O'Hara, Jennifer; De Moortel, Ineke
2015IAUGA..2254861O    Altcode:
  We present the results of numerical simulations of reconnection between
  flux tubes driven by rotational footpoint motions using the 3D MHD
  code, Lare3d. The basic model consists of two, initially aligned, flux
  tubes that are forced to interact by rotational driving velocities
  on the flux concentrations on the boundaries. We extend this model
  by altering the number, distribution and strength of the sources,
  while maintaining the same total magnetic flux on the boundaries. In
  all cases, the magnetic field is stressed by the boundary motions and
  a current grows within the volume. We examine the dynamical evolution
  and the resultant magnitude, distribution and timing of the heating
  events for the different flux distributions.

---------------------------------------------------------
Title: On the Parallel and Perpendicular Propagating Motions Visible
inPolar Plumes: An Incubator For (Fast) Solar Wind Acceleration?
Authors: Liu, Jiajia; McIntosh, Scott W.; De Moortel, Ineke; Wang,
   Yuming
2015ApJ...806..273L    Altcode: 2015arXiv150700143L
  We combine observations of the Coronal Multi-channel Polarimeter and the
  Atmospheric Imaging Assembly on board the Solar Dynamics Observatory
  to study the characteristic properties of (propagating) Alfvénic
  motions and quasi-periodic intensity disturbances in polar plumes. This
  unique combination of instruments highlights the physical richness of
  the processes taking place at the base of the (fast) solar wind. The
  (parallel) intensity perturbations with intensity enhancements around
  1% have an apparent speed of 120 km s<SUP>-1</SUP> (in both the 171
  and 193 Å passbands) and a periodicity of 15 minutes, while the
  (perpendicular) Alfvénic wave motions have a velocity amplitude
  of 0.5 km s<SUP>-1</SUP>, a phase speed of 830 km s<SUP>-1</SUP>,
  and a shorter period of 5 minutes on the same structures. These
  observations illustrate a scenario where the excited Alfvénic
  motions are propagating along an inhomogeneously loaded magnetic field
  structure such that the combination could be a potential progenitor
  of the magnetohydrodynamic turbulence required to accelerate the fast
  solar wind.

---------------------------------------------------------
Title: Excitation and damping of broadband kink waves in the solar
    corona
Authors: Pascoe, D. J.; Wright, A. N.; De Moortel, I.; Hood, A. W.
2015A&A...578A..99P    Altcode:
  Context. Observations such as those by the Coronal Multi-Channel
  Polarimeter (CoMP) have revealed that broadband kink oscillations
  are ubiquitous in the solar corona. <BR /> Aims: We consider
  footpoint-driven kink waves propagating in a low β coronal plasma with
  a cylindrical density structure. We investigate the excitation and
  damping of propagating kink waves by a broadband driver, including
  the effects of different spatial profiles for the driver. <BR />
  Methods: We employ a general spatial damping profile in which the
  initial stage of the damping envelope is approximated by a Gaussian
  profile and the asymptotic state by an exponential one. We develop
  a method of accounting for the presence of these different damping
  regimes and test it using data from numerical simulations. <BR />
  Results: Strongly damped oscillations in low density coronal loops
  are more accurately described by a Gaussian spatial damping profile
  than an exponential profile. The consequences for coronal seismology
  are investigated and applied to observational data for the ubiquitous
  broadband waves observed by CoMP. Current data cannot distinguish
  between the exponential and Gaussian profiles because of the levels
  of noise. We demonstrate the importance of the spatial profile of the
  driver on the resulting damping profile. Furthermore, we show that a
  small-scale turbulent driver is inefficient at exciting propagating
  kink waves.

---------------------------------------------------------
Title: Recent advances in coronal heating
Authors: De Moortel, Ineke; Browning, Philippa
2015RSPTA.37340269D    Altcode: 2015arXiv151000977D
  The solar corona, the tenuous outer atmosphere of the Sun, is orders of
  magnitude hotter than the solar surface. This 'coronal heating problem'
  requires the identification of a heat source to balance losses due to
  thermal conduction, radiation and (in some locations) convection. The
  review papers in this Theo Murphy meeting issue present an overview
  of recent observational findings, large- and small-scale numerical
  modelling of physical processes occurring in the solar atmosphere
  and other aspects which may affect our understanding of the proposed
  heating mechanisms. At the same time, they also set out the directions
  and challenges which must be tackled by future research. In this brief
  introduction, we summarize some of the issues and themes which reoccur
  throughout this issue.

---------------------------------------------------------
Title: Observational Signatures of Waves and Flows in the Solar Corona
Authors: De Moortel, I.; Antolin, P.; Van Doorsselaere, T.
2015SoPh..290..399D    Altcode: 2014SoPh..tmp..133D; 2015arXiv151001030D
  Propagating perturbations have been observed in extended coronal loop
  structures for a number of years, but the interpretation in terms of
  slow (propagating) magneto-acoustic waves and/or as quasi-periodic
  upflows remains unresolved. We used forward-modelling to construct
  observational signatures associated with a simple slow magneto-acoustic
  wave or periodic flow model. Observational signatures were computed
  for the 171 Å Fe IX and the 193 Å Fe XII spectral lines. Although
  there are many differences between the flow and wave models, we did
  not find any clear, robust observational characteristics that can be
  used in isolation (i.e. that do not rely on a comparison between the
  models). For the waves model, a relatively rapid change of the average
  line widths as a function of (shallow) line-of-sight angles was found,
  whereas the ratio of the line width amplitudes to the Doppler velocity
  amplitudes is relatively high for the flow model. The most robust
  observational signature found is that the ratio of the mean to the
  amplitudes of the Doppler velocity is always higher than one for the
  flow model. This ratio is substantially higher for flows than for
  waves, and for the flows model used in the study is exactly the same
  in the 171 Å Fe IX and the 193 Å Fe XII spectral lines. However,
  these potential observational signatures need to be treated cautiously
  because they are likely to be model-dependent.

---------------------------------------------------------
Title: Statistical Evidence for the Existence of Alfvénic Turbulence
    in Solar Coronal Loops
Authors: Liu, Jiajia; McIntosh, Scott W.; De Moortel, Ineke; Threlfall,
   James; Bethge, Christian
2014ApJ...797....7L    Altcode: 2014arXiv1411.5094L
  Recent observations have demonstrated that waves capable of
  carrying large amounts of energy are ubiquitous throughout the solar
  corona. However, the question of how this wave energy is dissipated
  (on which timescales and length scales) and released into the plasma
  remains largely unanswered. Both analytic and numerical models have
  previously shown that Alfvénic turbulence may play a key role not
  only in the generation of the fast solar wind, but in the heating
  of coronal loops. In an effort to bridge the gap between theory and
  observations, we expand on a recent study by analyzing 37 clearly
  isolated coronal loops using data from the Coronal Multi-channel
  Polarimeter instrument. We observe Alfvénic perturbations with phase
  speeds which range from 250 to 750 km s<SUP>-1</SUP> and periods from
  140 to 270 s for the chosen loops. While excesses of high-frequency wave
  power are observed near the apex of some loops (tentatively supporting
  the onset of Alfvénic turbulence), we show that this excess depends on
  loop length and the wavelength of the observed oscillations. In deriving
  a proportional relationship between the loop length/wavelength ratio
  and the enhanced wave power at the loop apex, and from the analysis
  of the line widths associated with these loops, our findings are
  supportive of the existence of Alfvénic turbulence in coronal loops.

---------------------------------------------------------
Title: Standing Kink Modes in Three-dimensional Coronal Loops
Authors: Pascoe, D. J.; De Moortel, I.
2014ApJ...784..101P    Altcode:
  So far, the straight flux tube model proposed by Edwin &amp; Roberts
  is the most commonly used tool in practical coronal seismology,
  in particular, to infer values of the (coronal) magnetic field from
  observed, standing kink mode oscillations. In this paper, we compare
  the period predicted by this basic model with three-dimensional (3D)
  numerical simulations of standing kink mode oscillations, as the period
  is a crucial parameter in the seismological inversion to determine the
  magnetic field. We perform numerical simulations of standing kink modes
  in both straight and curved 3D coronal loops and consider excitation
  by internal and external drivers. The period of oscillation for the
  displacement of dense coronal loops is determined by the loop length
  and the kink speed, in agreement with the estimate based on analytical
  theory for straight flux tubes. For curved coronal loops embedded in
  a magnetic arcade and excited by an external driver, a secondary mode
  with a period determined by the loop length and external Alfvén speed
  is also present. When a low number of oscillations is considered, these
  two periods can result in a single, non-resolved (broad) peak in the
  power spectrum, particularly for low values of the density contrast
  for which the two periods will be relatively similar. In that case
  (and for this particular geometry), the presence of this additional
  mode would lead to ambiguous seismological estimates of the magnetic
  field strength.

---------------------------------------------------------
Title: Potential Evidence for the Onset of Alfvénic Turbulence in
    Trans-equatorial Coronal Loops
Authors: De Moortel, I.; McIntosh, S. W.; Threlfall, J.; Bethge, C.;
   Liu, J.
2014ApJ...782L..34D    Altcode:
  This study investigates Coronal Multi-channel Polarimeter Doppler-shift
  observations of a large, off-limb, trans-equatorial loop system observed
  on 2012 April 10-11. Doppler-shift oscillations with a broad range of
  frequencies are found to propagate along the loop with a speed of about
  500 km s<SUP>-1</SUP>. The power spectrum of perturbations travelling
  up from both loop footpoints is remarkably symmetric, probably due to
  the almost perfect north-south alignment of the loop system. Compared
  to the power spectrum at the footpoints of the loop, the Fourier power
  at the apex appears to be higher in the high-frequency part of the
  spectrum than expected from theoretical models. We suggest this excess
  high-frequency power could be tentative evidence for the onset of a
  cascade of the low-to-mid frequency waves into (Alfvénic) turbulence.

---------------------------------------------------------
Title: The Evolving Magnetic Scales of the Outer Solar Atmosphere
    and Their Potential Impact on Heliospheric Turbulence
Authors: McIntosh, Scott W.; Bethge, Christian; Threlfall, James;
   De Moortel, Ineke; Leamon, Robert J.; Tian, Hui
2013arXiv1311.2538M    Altcode:
  The presence of turbulent phenomena in the outer solar atmosphere
  is a given. However, because we are reduced to remotely sensing the
  atmosphere of a star with instruments of limited spatial and/or spectral
  resolution, we can only infer the physical progression from macroscopic
  to microscopic phenomena. Even so, we know that many, if not all,
  of the turbulent phenomena that pervade interplanetary space have
  physical origins at the Sun and so in this brief article we consider
  some recent measurements which point to sustained potential source(s)
  of heliospheric turbulence in the magnetic and thermal domains. In
  particular, we look at the scales of magnetism that are imprinted on
  the outer solar atmosphere by the relentless magneto-convection of the
  solar interior and combine state-of-the-art observations from the Solar
  Dynamics Observatory (SDO) and the Coronal Multi-channel Polarimeter
  (CoMP) which are beginning to hint at the origins of the wave/plasma
  interplay prevalent closer to the Earth. While linking these disparate
  scales of observation and understanding of their connection is near
  to impossible, it is clear that the constant evolution of subsurface
  magnetism on a host of scales guides and governs the flow of mass
  and energy at the smallest scales. In the near future significant
  progress in this area will be made by linking observations from high
  resolution platforms like the Interface Region Imaging Spectrograph
  (IRIS) and Advanced Technology Solar Telescope (ATST) with full-disk
  synoptic observations such as those presented herein.

---------------------------------------------------------
Title: First comparison of wave observations from CoMP and AIA/SDO
Authors: Threlfall, J.; De Moortel, I.; McIntosh, S. W.; Bethge, C.
2013A&A...556A.124T    Altcode: 2013arXiv1306.3354T
  Context. Waves have long been thought to contribute to the heating
  of the solar corona and the generation of the solar wind. Recent
  observations have demonstrated evidence of quasi-periodic longitudinal
  disturbances and ubiquitous transverse wave propagation in many
  different coronal environments. <BR /> Aims: This paper investigates
  signatures of different types of oscillatory behaviour, both above
  the solar limb and on-disk, by comparing findings from the Coronal
  Multi-channel Polarimeter (CoMP) and the Atmospheric Imaging
  Assembly (AIA) on-board the Solar Dynamics Observatory (SDO) for
  the same active region. <BR /> Methods: We study both transverse and
  longitudinal motion by comparing and contrasting time-distance images
  of parallel and perpendicular cuts along/across active region fan
  loops. Comparisons between parallel space-time diagram features in
  CoMP Doppler velocity and transverse oscillations in AIA images are
  made, together with space-time analysis of propagating quasi-periodic
  intensity features seen near the base of loops in AIA. <BR /> Results:
  Signatures of transverse motions are observed along the same magnetic
  structure using CoMP Doppler velocity (v<SUB>phase</SUB> = 600 → 750
  km s<SUP>-1</SUP>, P = 3 → 6 min) and in AIA/SDO above the limb (P =
  3 → 8 min). Quasi-periodic intensity features (v<SUB>phase</SUB> =
  100 → 200 km s<SUP>-1</SUP>, P = 6 → 11 min) also travel along the
  base of the same structure. On the disk, signatures of both transverse
  and longitudinal intensity features were observed by AIA, and both show
  similar properties to signatures found along structures anchored in
  the same active region three days earlier above the limb. Correlated
  features are recovered by space-time analysis of neighbouring tracks
  over perpendicular distances of ≲2.6 Mm.

---------------------------------------------------------
Title: Damping of kink waves by mode coupling. I. Analytical treatment
Authors: Hood, A. W.; Ruderman, M.; Pascoe, D. J.; De Moortel, I.;
   Terradas, J.; Wright, A. N.
2013A&A...551A..39H    Altcode:
  <BR /> Aims: We investigate the spatial damping of propagating
  kink waves in an inhomogeneous plasma. In the limit of a thin tube
  surrounded by a thin transition layer, an analytical formulation
  for kink waves driven in from the bottom boundary of the corona
  is presented. <BR /> Methods: The spatial form for the damping
  of the kink mode was investigated using various analytical
  approximations. When the density ratio between the internal
  density and the external density is not too large, a simple
  differential-integral equation was used. Approximate analytical
  solutions to this equation are presented. <BR /> Results: For the
  first time, the form of the spatial damping of the kink mode is shown
  analytically to be Gaussian in nature near the driven boundary. For
  several wavelengths, the amplitude of the kink mode is proportional
  to (1 + exp(-z<SUP>2</SUP>/L<SUB>g</SUB><SUP>2</SUP>))/2, where
  L<SUB>g</SUB><SUP>2</SUP> = 16/ɛκ<SUP>2</SUP>k<SUP>2</SUP>. Although
  the actual value of 16 in L<SUB>g</SUB> depends on the particular
  form of the driver, this form is very general and its dependence on
  the other parameters does not change. For large distances, the damping
  profile appears to be roughly linear exponential decay. This is shown
  analytically by a series expansion when the inhomogeneous layer width
  is small enough. <P />Appendix A is available in electronic form at
  <A href="http://www.aanda.org">http://www.aanda.org</A>

---------------------------------------------------------
Title: Damping of kink waves by mode coupling. II. Parametric study
    and seismology
Authors: Pascoe, D. J.; Hood, A. W.; De Moortel, I.; Wright, A. N.
2013A&A...551A..40P    Altcode:
  Context. Recent observations of the corona reveal ubiquitous
  transverse velocity perturbations that undergo strong damping as
  they propagate. These can be understood in terms of propagating kink
  waves that undergo mode coupling in inhomogeneous regions. <BR />
  Aims: The use of these propagating waves as a seismological tool
  for the investigation of the solar corona depends upon an accurate
  understanding of how the mode coupling behaviour is determined by local
  plasma parameters. Our previous work suggests the exponential spatial
  damping profile provides a poor description of the behaviour of strongly
  damped kink waves. We aim to investigate the spatial damping profile
  in detail and provide a guide to the approximations most suitable
  for performing seismological inversions. <BR /> Methods: We propose
  a general spatial damping profile based on analytical results that
  accounts for the initial Gaussian stage of damped kink waves as well
  as the asymptotic exponential stage considered by previous authors. The
  applicability of this profile is demonstrated by a full parametric study
  of the relevant physical parameters. The implication of this profile
  for seismological inversions is investigated. <BR /> Results: The
  Gaussian damping profile is found to be most suitable for application
  as a seismological tool for observations of oscillations in loops with
  a low density contrast. This profile also provides accurate estimates
  for data in which only a few wavelengths or periods are observed.

---------------------------------------------------------
Title: The Source of 3 Minute Magnetoacoustic Oscillations in
    Coronal Fans
Authors: Jess, D. B.; De Moortel, I.; Mathioudakis, M.; Christian,
   D. J.; Reardon, K. P.; Keys, P. H.; Keenan, F. P.
2012ApJ...757..160J    Altcode: 2012arXiv1208.3194J
  We use images of high spatial, spectral, and temporal resolution,
  obtained using both ground- and space-based instrumentation, to
  investigate the coupling between wave phenomena observed at numerous
  heights in the solar atmosphere. Analysis of 4170 Å continuum images
  reveals small-scale umbral intensity enhancements, with diameters
  ~0farcs6, lasting in excess of 30 minutes. Intensity oscillations
  of ≈3 minutes are observed to encompass these photospheric
  structures, with power at least three orders of magnitude higher
  than the surrounding umbra. Simultaneous chromospheric velocity and
  intensity time series reveal an 87° ± 8° out-of-phase behavior,
  implying the presence of standing modes created as a result of
  partial wave reflection at the transition region boundary. We find a
  maximum waveguide inclination angle of ≈40° between photospheric
  and chromospheric heights, combined with a radial expansion factor
  of &lt;76%. An average blueshifted Doppler velocity of ≈1.5 km
  s<SUP>-1</SUP>, in addition to a time lag between photospheric and
  chromospheric oscillatory phenomena, confirms the presence of upwardly
  propagating slow-mode waves in the lower solar atmosphere. Propagating
  oscillations in EUV intensity are detected in simultaneous coronal
  fan structures, with a periodicity of 172 ± 17 s and a propagation
  velocity of 45 ± 7 km s<SUP>-1</SUP>. Numerical simulations reveal that
  the damping of the magnetoacoustic wave trains is dominated by thermal
  conduction. The coronal fans are seen to anchor into the photosphere
  in locations where large-amplitude umbral dot (UD) oscillations
  manifest. Derived kinetic temperature and emission measure time series
  display prominent out-of-phase characteristics, and when combined with
  the previously established sub-sonic wave speeds, we conclude that
  the observed EUV waves are the coronal counterparts of the upwardly
  propagating magnetoacoustic slow modes detected in the lower solar
  atmosphere. Thus, for the first time, we reveal how the propagation
  of 3 minute magnetoacoustic waves in solar coronal structures is a
  direct result of amplitude enhancements occurring in photospheric UDs.

---------------------------------------------------------
Title: Propagating Disturbances in Coronal Loops: A Detailed Analysis
    of Propagation Speeds
Authors: Kiddie, G.; De Moortel, I.; Del Zanna, G.; McIntosh, S. W.;
   Whittaker, I.
2012SoPh..279..427K    Altcode: 2012arXiv1205.0891K
  Quasi-periodic disturbances have been observed in the outer solar
  atmosphere for many years. Although first interpreted as upflows
  (Schrijver et al., Solar Phys.187, 261, 1999), they have been widely
  regarded as slow magneto-acoustic waves, due to their observed
  velocities and periods. However, recent observations have questioned
  this interpretation, as periodic disturbances in Doppler velocity,
  line width, and profile asymmetry were found to be in phase with the
  intensity oscillations (De Pontieu and McIntosh, Astrophys. J.722,
  1013, 2010; Tian, McIntosh, and De Pontieu, Astrophys. J. Lett.727,
  L37, 2011), suggesting that the disturbances could be quasi-periodic
  upflows. Here we conduct a detailed analysis of the velocities of
  these disturbances across several wavelengths using the Atmospheric
  Imaging Assembly (AIA) onboard the Solar Dynamics Observatory (SDO). We
  analysed 41 examples, including both sunspot and non-sunspot regions
  of the Sun. We found that the velocities of propagating disturbances
  (PDs) located at sunspots are more likely to be temperature dependent,
  whereas the velocities of PDs at non-sunspot locations do not show a
  clear temperature dependence. This suggests an interpretation in terms
  of slow magneto-acoustic waves in sunspots but the nature of PDs in
  non-sunspot (plage) regions remains unclear. We also considered on
  what scale the underlying driver is affecting the properties of the
  PDs. Finally, we found that removing the contribution due to the cooler
  ions in the 193 Å wavelength suggests that a substantial part of the
  193 Å emission of sunspot PDs can be attributed to the cool component
  of 193 Å.

---------------------------------------------------------
Title: Nonlinear wave propagation and reconnection at magnetic
    X-points in the Hall MHD regime
Authors: Threlfall, J.; Parnell, C. E.; De Moortel, I.; McClements,
   K. G.; Arber, T. D.
2012A&A...544A..24T    Altcode: 2012arXiv1202.3648T
  Context. The highly dynamical, complex nature of the solar atmosphere
  naturally implies the presence of waves in a topologically varied
  magnetic environment. Here, the interaction of waves with topological
  features such as null points is inevitable and potentially important
  for energetics. The low resistivity of the solar coronal plasma implies
  that non-magnetohydrodynamic (MHD) effects should be considered in
  studies of magnetic energy release in this environment. <BR /> Aims:
  This paper investigates the role of the Hall term in the propagation and
  dissipation of waves, their interaction with 2D magnetic X-points and
  the nature of the resulting reconnection. <BR /> Methods: A Lagrangian
  remap shock-capturing code (Lare2d) was used to study the evolution of
  an initial fast magnetoacoustic wave annulus for a range of values of
  the ion skin depth (δ<SUB>i</SUB>) in resistive Hall MHD. A magnetic
  null-point finding algorithm was also used to locate and track the
  evolution of the multiple null-points that are formed in the system. <BR
  /> Results: Depending on the ratio of ion skin depth to system size,
  our model demonstrates that Hall effects can play a key role in the
  wave-null interaction. In particular, the initial fast-wave pulse now
  consists of whistler and ion-cyclotron components; the dispersive nature
  of the whistler wave leads to (i) earlier interaction with the null;
  (ii) the creation of multiple additional, transient nulls and, hence,
  an increased number of energy release sites. In the Hall regime, the
  relevant timescales (such as the onset of reconnection and the period
  of the oscillatory relaxation) of the system are reduced significantly,
  and the reconnection rate is enhanced.

---------------------------------------------------------
Title: A contemporary view of coronal heating
Authors: Parnell, C. E.; De Moortel, I.
2012RSPTA.370.3217P    Altcode: 2012arXiv1206.6097P
  Determining the heating mechanism (or mechanisms) that causes the outer
  atmosphere of the Sun, and many other stars, to reach temperatures
  orders of magnitude higher than their surface temperatures has long
  been a key problem. For decades the problem has been known as the
  coronal heating problem, but it is now clear that `coronal heating'
  cannot be treated or explained in isolation and that the heating of the
  whole solar atmosphere must be studied as a highly coupled system. The
  magnetic field of the star is known to play a key role, but, despite
  significant advancements in solar telescopes, computing power and
  much greater understanding of theoretical mechanisms, the question
  of which mechanism or mechanisms are the dominant supplier of energy
  to the chromosphere and corona is still open. Following substantial
  recent progress, we consider the most likely contenders and discuss
  the key factors that have made, and still make, determining the actual
  (coronal) heating mechanism (or mechanisms) so difficult.

---------------------------------------------------------
Title: Magnetohydrodynamic waves and coronal seismology: an overview
    of recent results
Authors: De Moortel, I.; Nakariakov, V. M.
2012RSPTA.370.3193D    Altcode: 2012arXiv1202.1944D
  Recent observations have revealed that MHD waves and oscillations are
  ubiquitous in the solar atmosphere, with a wide range of periods. We
  give a brief review of some aspects of MHD waves and coronal seismology
  which have recently been the focus of intense debate or are newly
  emerging. In particular, we focus on four topics: (i) the current
  controversy surrounding propagating intensity perturbations along
  coronal loops, (ii) the interpretation of propagating transverse
  loop oscillations, (iii) the ongoing search for coronal (torsional)
  Alfven waves and (iv) the rapidly developing topic of quasi-periodic
  pulsations (QPP) in solar flares.

---------------------------------------------------------
Title: The Fifth Hinode Science Meeting
Authors: Golub, L.; De Moortel, I.; Shimizu, T.
2012ASPC..456.....G    Altcode:
  No abstract at ADS

---------------------------------------------------------
Title: Spatial damping of propagating kink waves due to mode coupling
Authors: Pascoe, D. J.; Hood, A. W.; de Moortel, I.; Wright, A. N.
2012A&A...539A..37P    Altcode:
  <BR /> Aims: We investigate the damping process for propagating
  transverse velocity oscillations, observed to be ubiquitous in the
  solar corona, due to mode coupling. <BR /> Methods: We perform
  3D numerical simulations of footpoint-driven transverse waves
  propagating in a low β coronal plasma with a cylindrical density
  structure. Mode coupling in an inhomogeneous layer leads to the
  coupling of the kink mode to the Alfvén mode, observed as the decay
  of the transverse kink oscillations. <BR /> Results: We consider the
  spatial damping profile and find a Gaussian damping profile of the form
  exp(-z<SUP>2</SUP>/L<SUB>g</SUB><SUP>2</SUP>) to be the most congruent
  with our numerical data, rather than the exponential damping profile
  of the form exp(- z/L<SUB>d</SUB>) used in normal mode analysis. Our
  results highlight that the nature of the driver itself will have
  a substantial influence on observed propagating kink waves. <BR />
  Conclusions: Our study suggests that this modified damping profile
  should be taken into account when using coronal seismology to infer
  local plasma properties from observed damped oscillations.

---------------------------------------------------------
Title: Coupling, damping and dissipation of magnetic waves in the
    chromosphere and corona
Authors: De Moortel, I.
2012decs.confE..46D    Altcode:
  In this talk I will give an overview of current (numerical) modelling
  of MHD waves and oscillations, emphasising in particular the process
  of mode coupling. Can models predict the observed damping rates
  and energy flux? How reliable are the comparisons between theory
  and observations? As observations of waves and oscillations become
  increasingly more detailed, it has become clear that the role of wave
  heating of the solar atmosphere has to be reassessed. I will highlight
  some of the recent modelling results as well as try to outline where
  future efforts are needed.

---------------------------------------------------------
Title: What we can and cannot learn from seismology of the solar
    atmosphere
Authors: De Moortel, I.
2012decs.confE..45D    Altcode:
  During the last decade or so, new instruments have revealed a
  surprisingly large number of observations of oscillatory behaviour
  in the solar atmosphere. Both standing and propagating waves have now
  been detected in a variety of different structures with a wide range
  of instruments. After the initial euphoria in coronal seismology
  applications, the subject now needs to go through a period of
  consolidating and verifying results. So, what can we actually learn
  from coronal seismology? This talk will invite the community to debate
  future directions for both theoretical modelling and observational
  campaigns. How robust are the basic MHD waves models? Do they apply
  in the highly dynamical and structured solar atmosphere? What can we
  learn from numerical modelling? And what exactly can we deduce from
  the observations?

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Title: What can we learn from propagating Alfvenic waves?
Authors: Pascoe, D. J.; De Moortel, I.; Hood, A. W.; Wright, A. N.
2012decs.confE..24P    Altcode:
  Observations have revealed ubiquitous transverse velocity perturbation
  waves propagating in the solar corona. We perform 3D numerical
  simulations of footpoint-driven transverse waves propagating in a
  low beta plasma. When density structuring is present, mode coupling
  in inhomogeneous regions leads to the coupling of the kink mode to the
  Alfvén mode. The frequency-dependent decay of the propagating kink wave
  is observed as energy is transferred to the local Alfvén mode. Modest
  changes in density are capable of efficiently converting energy from the
  driving footpoint motion to localised Alfvén modes. Thus, realistic
  transverse footpoint motions will deposit energy to (azimuthal)
  Alfvén modes in the corona. Mode coupling is investigated in detail
  for propagating kink modes as an explanation for the observed wave
  damping and as a possible seismological tool. The observed strong
  damping of the Doppler shift oscillations indicates the presence of
  wide inhomogeneous layers at the edges of the loops. Our simulations
  (backed up by analytical calculations) show that in this regime, the
  traditional exp(-z/L) damping rate no longer applies. Hence, care has
  to be taken when seismologically inferring damping lengths from the
  observed oscillations. In addition, taking into account line-of-sight
  integration of multiple loops supporting transverse oscillations, we
  show that the energy budget present in the 3D coronal volume could be
  substantially higher than the energy budget derived from the observed
  Doppler shift oscillations.

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Title: The Effects of Line-of-sight Integration on Multistrand
    Coronal Loop Oscillations
Authors: De Moortel, I.; Pascoe, D. J.
2012ApJ...746...31D    Altcode:
  Observations have shown that transverse oscillations are present
  in a multitude of coronal structures. It is generally assumed that
  these oscillations are driven by (sub)surface footpoint motions. Using
  fully three-dimensional MHD simulations, we show that these footpoint
  perturbations generate propagating kink (Alfvénic) modes which couple
  very efficiently into (azimuthal) Alfvén waves. Using an ensemble of
  randomly distributed loops, driven by footpoint motions with random
  periods and directions, we compare the absolute energy in the numerical
  domain with the energy that is "visible" when integrating along the
  line of sight (LOS). We show that the kinetic energy derived from the
  LOS Doppler velocities is only a small fraction of the actual energy
  provided by the footpoint motions. Additionally, the superposition of
  loop structures along the LOS makes it nearly impossible to identify
  which structure the observed oscillations are actually associated with
  and could impact the identification of the mode of oscillation.

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Title: Computer Vision for the Solar Dynamics Observatory (SDO)
Authors: Martens, P. C. H.; Attrill, G. D. R.; Davey, A. R.; Engell,
   A.; Farid, S.; Grigis, P. C.; Kasper, J.; Korreck, K.; Saar, S. H.;
   Savcheva, A.; Su, Y.; Testa, P.; Wills-Davey, M.; Bernasconi, P. N.;
   Raouafi, N. -E.; Delouille, V. A.; Hochedez, J. F.; Cirtain, J. W.;
   DeForest, C. E.; Angryk, R. A.; De Moortel, I.; Wiegelmann, T.;
   Georgoulis, M. K.; McAteer, R. T. J.; Timmons, R. P.
2012SoPh..275...79M    Altcode: 2011SoPh..tmp..144M; 2011SoPh..tmp..213M; 2011SoPh..tmp....8M
  In Fall 2008 NASA selected a large international consortium to produce
  a comprehensive automated feature-recognition system for the Solar
  Dynamics Observatory (SDO). The SDO data that we consider are all of the
  Atmospheric Imaging Assembly (AIA) images plus surface magnetic-field
  images from the Helioseismic and Magnetic Imager (HMI). We produce
  robust, very efficient, professionally coded software modules that
  can keep up with the SDO data stream and detect, trace, and analyze
  numerous phenomena, including flares, sigmoids, filaments, coronal
  dimmings, polarity inversion lines, sunspots, X-ray bright points,
  active regions, coronal holes, EIT waves, coronal mass ejections
  (CMEs), coronal oscillations, and jets. We also track the emergence and
  evolution of magnetic elements down to the smallest detectable features
  and will provide at least four full-disk, nonlinear, force-free magnetic
  field extrapolations per day. The detection of CMEs and filaments is
  accomplished with Solar and Heliospheric Observatory (SOHO)/Large
  Angle and Spectrometric Coronagraph (LASCO) and ground-based Hα
  data, respectively. A completely new software element is a trainable
  feature-detection module based on a generalized image-classification
  algorithm. Such a trainable module can be used to find features that
  have not yet been discovered (as, for example, sigmoids were in the
  pre-Yohkoh era). Our codes will produce entries in the Heliophysics
  Events Knowledgebase (HEK) as well as produce complete catalogs for
  results that are too numerous for inclusion in the HEK, such as the
  X-ray bright-point metadata. This will permit users to locate data on
  individual events as well as carry out statistical studies on large
  numbers of events, using the interface provided by the Virtual Solar
  Observatory. The operations concept for our computer vision system is
  that the data will be analyzed in near real time as soon as they arrive
  at the SDO Joint Science Operations Center and have undergone basic
  processing. This will allow the system to produce timely space-weather
  alerts and to guide the selection and production of quicklook images and
  movies, in addition to its prime mission of enabling solar science. We
  briefly describe the complex and unique data-processing pipeline,
  consisting of the hardware and control software required to handle
  the SDO data stream and accommodate the computer-vision modules, which
  has been set up at the Lockheed-Martin Space Astrophysics Laboratory
  (LMSAL), with an identical copy at the Smithsonian Astrophysical
  Observatory (SAO).

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Title: Review Article: MHD Wave Propagation Near Coronal Null Points
    of Magnetic Fields
Authors: McLaughlin, J. A.; Hood, A. W.; de Moortel, I.
2011SSRv..158..205M    Altcode: 2010SSRv..tmp..174M; 2010arXiv1004.5568M; 2010SSRv..tmp..157M
  We present a comprehensive review of MHD wave behaviour in the
  neighbourhood of coronal null points: locations where the magnetic
  field, and hence the local Alfvén speed, is zero. The behaviour of
  all three MHD wave modes, i.e. the Alfvén wave and the fast and slow
  magnetoacoustic waves, has been investigated in the neighbourhood
  of 2D, 2.5D and (to a certain extent) 3D magnetic null points, for
  a variety of assumptions, configurations and geometries. In general,
  it is found that the fast magnetoacoustic wave behaviour is dictated
  by the Alfvén-speed profile. In a β=0 plasma, the fast wave is
  focused towards the null point by a refraction effect and all the
  wave energy, and thus current density, accumulates close to the null
  point. Thus, null points will be locations for preferential heating
  by fast waves. Independently, the Alfvén wave is found to propagate
  along magnetic fieldlines and is confined to the fieldlines it is
  generated on. As the wave approaches the null point, it spreads out due
  to the diverging fieldlines. Eventually, the Alfvén wave accumulates
  along the separatrices (in 2D) or along the spine or fan-plane (in
  3D). Hence, Alfvén wave energy will be preferentially dissipated at
  these locations. It is clear that the magnetic field plays a fundamental
  role in the propagation and properties of MHD waves in the neighbourhood
  of coronal null points. This topic is a fundamental plasma process and
  results so far have also lead to critical insights into reconnection,
  mode-coupling, quasi-periodic pulsations and phase-mixing.

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Title: Solar physics: Waves galore
Authors: Cargill, Peter; de Moortel, Ineke
2011Natur.475..463C    Altcode:
  Wave energy has long been proposed to be a source of the hot solar
  corona and fast solar wind. Direct measurements made by spacecraft
  have finally established that coronal waves are ubiquitous and can
  have the required energy. See Letter p.477

---------------------------------------------------------
Title: Observed Damping of the Slow Magnetoacoustic Mode
Authors: Marsh, M. S.; De Moortel, I.; Walsh, R. W.
2011ApJ...734...81M    Altcode: 2011arXiv1104.1100M
  Spectroscopic and stereoscopic imaging observations of slow
  magnetoacoustic wave propagation within a coronal loop are investigated
  to determine the decay length scale of the slow magnetoacoustic
  mode in three dimensions and the density profile within the loop
  system. The slow wave is found to have an e-folding decay length scale
  of 20,000<SUP>+4000</SUP> <SUB>- 3000</SUB> km with a uniform density
  profile along the loop base. These observations place quantitative
  constraints on the modeling of wave propagation within coronal
  loops. Theoretical forward modeling suggests that magnetic field line
  divergence is the dominant damping factor and thermal conduction
  is insufficient, given the observed parameters of the coronal loop
  temperature, density, and wave mode period.

---------------------------------------------------------
Title: Coupled Alfvén and kink oscillations in an inhomogeneous
    corona
Authors: Pascoe, David J.; Wright, Andrew N.; De Moortel, Ineke
2011IAUS..274..129P    Altcode:
  We perform 3D numerical simulations of footpoint-driven transverse
  waves propagating in a low β plasma. The presence of inhomogeneities
  in the density profile leads to the coupling of the driven kink mode
  to Alfvén modes by resonant absorption. The decay of the propagating
  kink wave as energy is transferred to the local Alfvén mode is in good
  agreement with a modified interpretation of the analytical expression
  derived for standing kink modes. This coupling may account for the
  damping of transverse velocity perturbation waves which have recently
  been observed to be ubiquitous in the solar corona.

---------------------------------------------------------
Title: Propagating Coupled Alfvén and Kink Oscillations in an
    Arbitrary Inhomogeneous Corona
Authors: Pascoe, D. J.; Wright, A. N.; De Moortel, I.
2011ApJ...731...73P    Altcode:
  Observations have revealed ubiquitous transverse velocity perturbation
  waves propagating in the solar corona. We perform three-dimensional
  numerical simulations of footpoint-driven transverse waves propagating
  in a low β plasma. We consider the cases of distorted cylindrical
  flux tubes and a randomly generated inhomogeneous medium. When density
  structuring is present, mode coupling in inhomogeneous regions leads
  to the coupling of the kink mode to the Alfvén mode. The decay of the
  propagating kink wave is observed as energy is transferred to the local
  Alfvén mode. In all cases considered, modest changes in density were
  capable of efficiently converting energy from the driving footpoint
  motion to localized Alfvén modes. We have demonstrated that mode
  coupling efficiently couples propagating kink perturbations to Alfvén
  modes in an arbitrary inhomogeneous medium. This has the consequence
  that transverse footpoint motions at the base of the corona will
  deposit energy to Alfvén modes in the corona.

---------------------------------------------------------
Title: Phase mixing of nonlinear visco-resistive Alfvén waves
Authors: McLaughlin, J. A.; de Moortel, I.; Hood, A. W.
2011A&A...527A.149M    Altcode: 2011arXiv1101.5945M
  <BR /> Aims: We investigate the behaviour of nonlinear, nonideal Alfvén
  wave propagation within an inhomogeneous magnetic environment. <BR />
  Methods: The governing MHD equations are solved in 1D and 2D using
  both analytical techniques and numerical simulations. <BR /> Results:
  We find clear evidence for the ponderomotive effect and visco-resistive
  heating. The ponderomotive effect generates a longitudinal component
  to the transverse Alfvén wave, with a frequency twice that of the
  driving frequency. Analytical work shows the addition of resistive
  heating. This leads to a substantial increase in the local temperature
  and thus gas pressure of the plasma, resulting in material being pushed
  along the magnetic field. In 2D, our system exhibits phase mixing and
  we observe an evolution in the location of the maximum heating, i.e. we
  find a drifting of the heating layer. <BR /> Conclusions: Considering
  Alfvén wave propagation in 2D with an inhomogeneous density gradient,
  we find that the equilibrium density profile is significantly modified
  by both the flow of density due to visco-resistive heating and the
  nonlinear response to the localised heating through phase mixing.

---------------------------------------------------------
Title: Alfvén wave phase-mixing and damping in the ion cyclotron
    range of frequencies
Authors: Threlfall, J.; McClements, K. G.; De Moortel, I.
2011A&A...525A.155T    Altcode: 2010arXiv1007.4752T
  <BR /> Aims: We determine the effect of the Hall term in the generalised
  Ohm's law on the damping and phase mixing of Alfvén waves in the ion
  cyclotron range of frequencies in uniform and non-uniform equilibrium
  plasmas. <BR /> Methods: Wave damping in a uniform plasma is treated
  analytically, whilst a Lagrangian remap code (Lare2d) is used to
  study Hall effects on damping and phase mixing in the presence of
  an equilibrium density gradient. <BR /> Results: The magnetic energy
  associated with an initially Gaussian field perturbation in a uniform
  resistive plasma is shown to decay algebraically at a rate that is
  unaffected by the Hall term to leading order in k<SUP>2</SUP>δ_i^2
  where k is wavenumber and δ_i is ion skin depth. A similar
  algebraic decay law applies to whistler perturbations in the limit
  k<SUP>2</SUP>δ_i^2 ≫ 1. In a non-uniform plasma it is found that
  the spatially-integrated damping rate due to phase mixing is lower in
  Hall MHD than it is in MHD, but the reduction in the damping rate,
  which can be attributed to the effects of wave dispersion, tends to
  zero in both the weak and strong phase mixing limits.

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Title: Periodic Spectral Line Asymmetries in Solar Coronal Structures
    from Slow Magnetoacoustic Waves
Authors: Verwichte, E.; Marsh, M.; Foullon, C.; Van Doorsselaere,
   T.; De Moortel, I.; Hood, A. W.; Nakariakov, V. M.
2010ApJ...724L.194V    Altcode:
  Recent spectral observations of upward moving quasi-periodic intensity
  perturbations in solar coronal structures have shown evidence of
  periodic line asymmetries near their footpoints. These observations
  challenge the established interpretation of the intensity perturbations
  in terms of propagating slow magnetoacoustic waves. We show that slow
  waves inherently have a bias toward enhancement of emission in the
  blue wing of the emission line due to in-phase behavior of velocity
  and density perturbations. We demonstrate that slow waves cause line
  asymmetries when the emission line is averaged over an oscillation
  period or when a quasi-static plasma component in the line of sight
  is included. Therefore, we conclude that slow magnetoacoustic waves
  remain a valid explanation for the observed quasi-periodic intensity
  perturbations.

---------------------------------------------------------
Title: Magnetic reconnection in the solar atmosphere: from proposal
    to paradigm
Authors: Cargill, Peter; Parnell, Clare; Browning, Philippa; de
   Moortel, Ineke; Hood, Alan
2010A&G....51c..31C    Altcode:
  MEETING REPORT On 13 November 2009, the RAS hosted a discussion meeting
  to commemorate the formal retirement of Prof. Eric Priest. Here Peter
  Cargill, Clare Parnell, Philippa Browning, Ineke de Moortel and Alan
  Hood examine how magnetic reconnection has evolved over the past
  50 years from an important but controversial proposal, to a general
  paradigm.

---------------------------------------------------------
Title: Coupled Alfvén and Kink Oscillations in Coronal Loops
Authors: Pascoe, D. J.; Wright, A. N.; De Moortel, I.
2010ApJ...711..990P    Altcode:
  Observations have revealed ubiquitous transverse velocity perturbation
  waves propagating in the solar corona. However, there is ongoing
  discussion regarding their interpretation as kink or Alfvén waves. To
  investigate the nature of transverse waves propagating in the solar
  corona and their potential for use as a coronal diagnostic in MHD
  seismology, we perform three-dimensional numerical simulations of
  footpoint-driven transverse waves propagating in a low β plasma. We
  consider the cases of both a uniform medium and one with loop-like
  density structure and perform a parametric study for our structuring
  parameters. When density structuring is present, resonant absorption
  in inhomogeneous layers leads to the coupling of the kink mode to
  the Alfvén mode. The decay of the propagating kink wave as energy
  is transferred to the local Alfvén mode is in good agreement with a
  modified interpretation of the analysis of Ruderman &amp; Roberts for
  standing kink modes. Numerical simulations support the most general
  interpretation of the observed loop oscillations as a coupling of the
  kink and Alfvén modes. This coupling may account for the observed
  predominance of outward wave power in longer coronal loops since the
  observed damping length is comparable to our estimate based on an
  assumption of resonant absorption as the damping mechanism.

---------------------------------------------------------
Title: Automated Feature and Event Detection with SDO AIA and HMI Data
Authors: Davey, Alisdair; Martens, P. C. H.; Attrill, G. D. R.;
   Engell, A.; Farid, S.; Grigis, P. C.; Kasper, J.; Korreck, K.; Saar,
   S. H.; Su, Y.; Testa, P.; Wills-Davey, M.; Savcheva, A.; Bernasconi,
   P. N.; Raouafi, N. -E.; Delouille, V. A.; Hochedez, J. F. .; Cirtain,
   J. W.; Deforest, C. E.; Angryk, R. A.; de Moortel, I.; Wiegelmann,
   T.; Georgouli, M. K.; McAteer, R. T. J.; Hurlburt, N.; Timmons, R.
2010cosp...38.2878D    Altcode: 2010cosp.meet.2878D
  The Solar Dynamics Observatory (SDO) represents a new frontier in
  quantity and quality of solar data. At about 1.5 TB/day, the data will
  not be easily digestible by solar physicists using the same methods
  that have been employed for images from previous missions. In order for
  solar scientists to use the SDO data effectively they need meta-data
  that will allow them to identify and retrieve data sets that address
  their particular science questions. We are building a comprehensive
  computer vision pipeline for SDO, abstracting complete metadata
  on many of the features and events detectable on the Sun without
  human intervention. Our project unites more than a dozen individual,
  existing codes into a systematic tool that can be used by the entire
  solar community. The feature finding codes will run as part of the SDO
  Event Detection System (EDS) at the Joint Science Operations Center
  (JSOC; joint between Stanford and LMSAL). The metadata produced will
  be stored in the Heliophysics Event Knowledgebase (HEK), which will be
  accessible on-line for the rest of the world directly or via the Virtual
  Solar Observatory (VSO) . Solar scientists will be able to use the
  HEK to select event and feature data to download for science studies.

---------------------------------------------------------
Title: Longitudinal Waves in Coronal Loops
Authors: de Moortel, I.
2009SSRv..149...65D    Altcode:
  Outwardly propagating intensity disturbances are a common feature in
  large, quiescent coronal loop structures. In this paper, an overview
  is given of the observed properties and the theoretical modelling. As a
  large number of events have been observed and analysed, good statistical
  results on the estimated parameters have now been obtained. The
  theoretical modelling mainly focuses on two distinct aspects, namely
  the observed rapid damping of the perturbations, thought to be due
  to thermal conduction and the origin of the driver. Leakage of the
  solar surface p-modes is the main candidate to explain the observed
  periodicity, due to the strong correlation between loop position and
  period and the filamentary nature of the observed coronal intensity
  perturbations. Recent observational results appear to confirm the
  leakage and subsequent upward propagation of the solar surface 5 minute
  oscillations into the overlying atmospheric layers.

---------------------------------------------------------
Title: Impulsively generated oscillations in a 3D coronal loop
Authors: Pascoe, D. J.; de Moortel, I.; McLaughlin, J. A.
2009A&A...505..319P    Altcode:
  Aims: The effect of changing the attack angle for the interaction of
  a fast MHD wave with a 3D coronal loop is studied, to investigate
  to what extent the properties of the excited transverse kink mode
  oscillations of the loop depend on this angle. <BR />Methods: 3D
  numerical simulations are performed of the interaction of a fast
  MHD wave, generated by a pressure pulse, with a 3D coronal loop. The
  loop itself is modelled as a density enhancement (with a finite plasma
  beta) within a magnetic arcade. The initial pressure pulse has a width
  comparable to the loop diameter and is situated outside of the loop,
  at the same height as the loop apex. This height is kept fixed but
  the (horizontal) angle between the pressure pulse and the loop is
  varied. <BR />Results: We find that the global, transverse kink mode is
  efficiently excited for a range of attack angles and qualitatively in
  agreement with theoretical expectations. The period and damping time are
  found to be independent of the attack angle. For larger values of the
  attack angle, the global (longitudinal) slow wave is excited, whereas
  for intermediate values the second harmonic kink mode is also present.

---------------------------------------------------------
Title: Putting Coronal Seismology Estimates of the Magnetic Field
    Strength to the Test
Authors: De Moortel, I.; Pascoe, D. J.
2009ApJ...699L..72D    Altcode:
  The magnetic field strength inside a model coronal loop is
  "estimated" using coronal seismology, to examine the reliability of
  magnetic field strengths derived from observed, transverse coronal
  loop oscillations. Three-dimensional numerical simulations of the
  interaction of an external pressure pulse with a coronal loop (modeled
  as a three-dimensional density enhancement inside a two-dimensional
  magnetic arcade) are analyzed and the "observed" properties of the
  excited transverse loop oscillations are used to derive the value of the
  local magnetic field strength, following the method of Nakariakov &amp;
  Ofman. Due to the (unexpected) change in periodicity, the magnetic field
  derived from our "observed" oscillation is substantially different from
  the actual (input) magnetic field value (approximately 50%). Coronal
  seismology can derive useful information about the local magnetic field,
  but the combined effect of the loop curvature, the density ratio, and
  aspect ratio of the loop appears to be more important than previously
  expected.

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Title: Computer Vision for The Solar Dynamics Observatory
Authors: Martens, Petrus C.; Angryk, R. A.; Bernasconi, P. N.; Cirtain,
   J. W.; Davey, A. R.; DeForest, C. E.; Delouille, V. A.; De Moortel,
   I.; Georgoulis, M. K.; Grigis, P. C.; Hochedez, J. E.; Kasper, J.;
   Korreck, K. E.; Reeves, K. K.; Saar, S. H.; Savcheva, A.; Su, Y.;
   Testa, P.; Wiegelmann, T.; Wills-Davey, M.
2009SPD....40.1711M    Altcode:
  NASA funded a large international consortium last year to produce
  a comprehensive system for automated feature recognition in SDO
  images. The data we consider are all AIA and EVE data plus surface
  magnetic field images from HMI. Helioseismology is addressed by another
  group. <P />We will produce robust and very efficient software modules
  that can keep up with the relentless SDO data stream and detect, trace,
  and analyze a large number of phenomena, including: flares, sigmoids,
  filaments, coronal dimmings, polarity inversion lines, sunspots,
  X-ray bright points, active regions, coronal holes, EIT waves, CME's,
  coronal oscillations, and jets. In addition we will track the emergence
  and evolution of magnetic elements down to the smallest features
  that are detectable, and we will also provide at least four full
  disk nonlinear force-free magnetic field extrapolations per day. <P
  />A completely new software element that rounds out this suite is a
  trainable feature detection module, which employs a generalized image
  classification algorithm to produce the texture features of the images
  analyzed. A user can introduce a number of examples of the phenomenon
  looked and the software will return images with similar features. We
  have tested a proto-type on TRACE data, and were able to "train" the
  algorithm to detect sunspots, active regions, and loops. Such a module
  can be used to find features that have not even been discovered yet,
  as, for example, sigmoids were in the pre-Yohkoh era. <P />Our codes
  will produce entries in the Helio Events Knowledge base, and that will
  permit users to locate data on individual events as well as carry out
  statistical studies on large numbers of events, using the interface
  provided by the Virtual Solar Observatory.

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Title: Nonlinear fast magnetoacoustic wave propagation in the
neighbourhood of a 2D magnetic X-point: oscillatory reconnection
Authors: McLaughlin, J. A.; De Moortel, I.; Hood, A. W.; Brady, C. S.
2009A&A...493..227M    Altcode: 2009arXiv0901.1781M
  Context: This paper extends the models of Craig &amp; McClymont
  (1991, ApJ, 371, L41) and McLaughlin &amp; Hood (2004, A&amp;A,
  420, 1129) to include finite β and nonlinear effects. <BR />Aims:
  We investigate the nature of nonlinear fast magnetoacoustic waves
  about a 2D magnetic X-point. <BR />Methods: We solve the compressible
  and resistive MHD equations using a Lagrangian remap, shock capturing
  code (Arber et al. 2001, J. Comp. Phys., 171, 151) and consider an
  initial condition in {v}×{B} \cdot {hat{z}} (a natural variable of
  the system). <BR />Results: We observe the formation of both fast and
  slow oblique magnetic shocks. The nonlinear wave deforms the X-point
  into a “cusp-like” point which in turn collapses to a current
  sheet. The system then evolves through a series of horizontal and
  vertical current sheets, with associated changes in connectivity,
  i.e. the system exhibits oscillatory reconnection. Our final state is
  non-potential (but in force balance) due to asymmetric heating from
  the shocks. Larger amplitudes in our initial condition correspond to
  larger values of the final current density left in the system. <BR
  />Conclusions: The inclusion of nonlinear terms introduces several
  new features to the system that were absent from the linear regime. <P
  />A movie is available in electronic form at http://www.aanda.org

---------------------------------------------------------
Title: Forward modelling to determine the observational signatures
    of propagating slow waves for TRACE, SoHO/CDS, and Hinode/EIS
Authors: Owen, N. R.; De Moortel, I.; Hood, A. W.
2009A&A...494..339O    Altcode:
  Context: The propagation and damping of slow MHD waves in the solar
  atmosphere are investigated by numerical simulations and forward
  modelling, with particular emphasis placed on waves with periodicities
  of the order of five minutes. <BR />Aims: We extend a coronal model
  by adding an equilibrium temperature gradient allowing study of wave
  propagation from the transition region to the corona. <BR />Methods:
  A 1D model is used that includes gravitational stratification
  and damping by thermal conduction, optically thin radiation, and
  compressive viscosity. Forward modelling of the simulation results,
  for both uniform and non-uniform equilibrium temperature profiles, is
  undertaken to establish the observational consequences of the physical
  processes involved for TRACE, SoHO/CDS, and Hinode/EIS. <BR />Results:
  The presence of thermal conduction causes a phase shift between the
  wave velocity, energy, and density. This shift may be observable by
  comparing Doppler velocity and intensity observations. Phase shifts are
  also seen between intensity observations by different instruments and
  between different spectral lines. This is an observational effect that
  arises due to the forward modelling process in which observations are
  synthesised, but it is not seen in the simulation results. Oscillations
  from the transition region are found to dominate the coronal emission
  for TRACE 171 Å by nearly two orders of magnitude.

---------------------------------------------------------
Title: Forward Modelling of Coronal Intensity Perturbations
Authors: De Moortel, I.; Bradshaw, S. J.
2008SoPh..252..101D    Altcode: 2008SoPh..tmp..139D
  In this paper, forward modelling is used to investigate the relation
  between given temperature and density perturbations and the resulting
  (synthesised) intensity perturbations, as would be observed by,
  e.g., TRACE and EIS (onboard Hinode). Complex and highly non-linear
  interactions between the components which make up the intensity
  (density, ionisation balance and emissivity) mean that it is non-trivial
  to reverse this process, i.e., obtain the density and temperature
  perturbations associated with observed intensity oscillations. In
  particular, it is found that the damping rate does not often `survive'
  the forward modelling process, highlighting the need for a very
  careful interpretation of observed (intensity) damping rates. With a
  few examples, it is demonstrated that in some cases even the period
  of the oscillations can be altered and that it is possible for two
  different sets of input temperature and density to lead to very similar
  intensities (the well-known `ill-posed' inversion process).

---------------------------------------------------------
Title: Coronal Seismology
Authors: De Moortel, I.
2008ESPM...12.3.26D    Altcode:
  The idea of exploiting observed oscillations as a diagnostic tool
  for determining the physical conditions of the coronal plasma was
  first suggested several decades ago. During the last few years, high
  quality space-based observations have shown evidence for waves and
  oscillations in a wide variety of solar structures, such as coronal
  loops, polar plumes and prominences. I will (very) briefly summarise
  MHD wave theory, which forms the basis for coronal seismology, as well
  as present some of the recent theoretical models. In particular, I will
  focus on how observations and theoretical modelling are intrinsically
  linked, both guided and constrained by each other.

---------------------------------------------------------
Title: The way forward for coronal heating
Authors: De Moortel, Ineke; Browning, Philippa; Bradshaw, Stephen J.;
   Pintér, Balázs; Kontar, Eduard P.
2008A&G....49c..21D    Altcode:
  Ineke De Moortel, Philippa K Browning, Stephen J Bradshaw, Balázs
  Pintér and Eduard P Kontar consider approaches to the longstanding
  and enigmatic problem of coronal heating, as presented at the RAS
  discussion meeting on 11 January 2008.

---------------------------------------------------------
Title: Coronal Loop Seismology: Selective Examples
Authors: De Moortel, I.
2008ASPC..383..266D    Altcode:
  The idea of exploiting observed oscillations as a diagnostic tool for
  determining the physical conditions of the coronal plasma was first
  suggested several decades ago. During the last few years, high quality
  space-based observations have shown evidence for waves and oscillations
  in a wide variety of solar structures, such as coronal loops, polar
  plumes and prominences. In this review, observations of propagating,
  slow waves and standing, fast modes in the solar corona are summarized
  and examples are given of how these observations can be used to deduce
  information about different physical properties of the solar corona. A
  few suggestions are made as to how the relatively large uncertainties
  in the derived parameters could be reduced.

---------------------------------------------------------
Title: An Estimate of P-Mode Damping by Wave Leakage
Authors: De Moortel, I.; Rosner, R.
2007SoPh..246...53D    Altcode:
  High-cadence TRACE observations show that outward-propagating
  intensity disturbances are a common feature in large, quiescent coronal
  loops. Analysis of the frequency distribution of these modes shows
  peaks at both three- and five-minute periods, indicating that they may
  be driven by the solar surface oscillations (p modes). The energy flux
  contained within the coronal intensity disturbances is of the order of
  (1.1±0.4)×10<SUP>3</SUP> ergs cm<SUP>−2</SUP> s<SUP>−1</SUP>. A
  simple order-of-magnitude estimate of the damping rate of the relevant
  p modes allows us to put an observational constraint on the damping of
  p modes and shows that leakage into the overlying coronal atmosphere
  might be able to account for a significant fraction of p-mode damping.

---------------------------------------------------------
Title: Magnetic reconnection in flux-tubes undergoing spinning
    footpoint motions
Authors: Wilmot-Smith, A. L.; De Moortel, I.
2007A&A...473..615W    Altcode:
  Aims:Photospheric motions acting on the coronal magnetic field have
  the potential to build up huge amounts of magnetic energy. The energy
  may be released through magnetic reconnection, and so a detailed
  understanding of the 3D process is crucial if its implications for
  coronal heating are to be fully addressed. <BR />Methods: A 3D MHD
  experiment is described in which misaligned magnetic flux tubes are
  subjected to simple spinning boundary motions. <BR />Results: The
  resulting shear between adjacent flux systems generates a twisted
  central separator current sheet that extends vertically throughout
  the domain. Current density is amplified to a sufficient extent that
  reconnection begins, and occurs everywhere along the separator current
  sheet, while the separatrix current sheets that exist in the early
  stages of the experiment are found to be unimportant in the systems
  dynamical evolution. In 2D cross-sections, the reconnection process
  exhibits many similarities to the regime of flux pile-up reconnection.

---------------------------------------------------------
Title: Observation of Higher Harmonic Coronal Loop Oscillations
Authors: De Moortel, I.; Brady, C. S.
2007ApJ...664.1210D    Altcode:
  A sequence of TRACE 171 Å observations taken on 2001 May 13 shows
  evidence of flare-induced, transverse coronal loop oscillations. We
  revisit this particular data set and present evidence of the
  presence of spatially resolved higher harmonics in the transverse loop
  displacements. The oscillations are identified as the second-harmonic,
  fast MHD kink waves (periods of 577-672 s), with higher harmonics
  (250-346 s) also present. The apparent absence of the fundamental
  mode and the fact that it is the second harmonic (P<SUB>2</SUB>) that
  dominates the oscillatory behavior of this particular loop may shed
  more light on either the excitation and/or the damping mechanism(s)
  of flare-induced, transverse loop oscillations.

---------------------------------------------------------
Title: Magnetic Field Extrapolations And Current Sheets
Authors: Welsch, Brian; De Moortel, I.; McTiernan, J. M.
2007AAS...210.9101W    Altcode: 2007BAAS...39Q.204W
  Solar flares and coronal mass ejections (CMEs) --- phenomena which
  impact our society, but are scientifically interesting in themselves ---
  are driven by free magnetic energy in the coronal magnetic field. Since
  the coronal magnetic field cannot be directly measured, modelers often
  extrapolate the coronal field from the photospheric magnetograms ---
  the only field measurements routinely available. The best extrapolation
  techniques assume that the field is force free (coronal currents
  parallel the magnetic field), but that currents are not simply a linear
  function of the magnetic field. Recent tests, however, suggest that
  such non-linear force-free field (NLFFF) extrapolation techniques
  often underestimate free magnetic energy. We hypothesize that, since
  relaxation-based NLFFF techniques tend to smooth field discontinuities,
  such approaches will fail when current sheets are present. Here,
  we test this hypothesis by applying the Optimization NLFFF method to
  two configurations from an MHD simulation --- one with strong current
  concentrations, and one with weak concentrations. This work is supported
  by a NASA Sun-Earth Connections Theory grant to UC-Berkeley.

---------------------------------------------------------
Title: Numerical modelling of 3D reconnection. II. Comparison between
    rotational and spinning footpoint motions
Authors: De Moortel, I.; Galsgaard, K.
2006A&A...459..627D    Altcode:
  The coronal magnetic field is constantly subjected to a variety of
  photospheric, footpoint motions, leading to the build up, and subsequent
  release, of magnetic energy. Two different types of footpoint motions
  are considered here, namely (large scale) rotating and (small scale)
  spinning, using 3D numerical MHD simulations. The initial model consists
  of two aligned, thin flux tubes, which are forced to interact due to
  the boundary driving of the footpoints. Two variations of this setup
  are studied, namely with and without an additional, constant, background
  magnetic field. The nature of the boundary motions determines the shape
  of the central current sheet, the driving force of the reconnection
  process, as well as the efficiency of the build up of quasi-separatrix
  layers (when B_bg ≠ 0). The reconnection process is more efficient for
  the rotating of the flux sources and when a background magnetic field
  is added. In general, heating due to large and small scale motions is
  of comparable magnitude when no background field is present. However,
  with an additional background magnetic field, heating due to small
  scale footpoint motions seems substantially more efficient.

---------------------------------------------------------
Title: Understanding Magnetic Structures in the Solar Corona Through
    Topological Analysis
Authors: Maclean, R. C.; Parnell, C. E.; De Moortel, I.; Büchner,
   J.; Priest, E. R.
2006ESASP.617E.156M    Altcode: 2006soho...17E.156M
  No abstract at ADS

---------------------------------------------------------
Title: Numerical modelling of 3D reconnection due to rotational
    footpoint motions
Authors: De Moortel, I.; Galsgaard, K.
2006A&A...451.1101D    Altcode:
  The rapid dynamical evolution of the photospheric magnetic carpet
  provides a large energy source for the solar corona. In this context,
  the role of 3D magnetic reconnection is crucial in releasing the free
  magnetic energy, build up due to the continuous footpoint motions. To
  understand the processes by which this can take place, we have to obtain
  a better understanding of the basic reconnection process that can take
  place in 3D magnetic field configurations. In this paper, we investigate
  magnetic reconnection, driven by rotational footpoint motions, using 3D
  numerical MHD simulations. The model consists of two positive and two
  negative sources, which are placed symmetrically on opposite boundaries
  of the cubic domain. The initially potential fluxtubes are forced to
  interact by the rotational driving of the flux concentrations on the
  boundaries. We consider two variations of this setup, namely with
  and without an additional, constant, background magnetic field. In
  the no-background case, the magnetic connectivity is divided into
  independent regions by separatrix surfaces, while the case with a
  background field is represented by one global connectivity region. The
  dynamical evolution is followed and found to differ significantly from
  the comparable potential evolution. Strong currents are concentrated
  along separatrix surfaces or rapidly developing quasi-separatrix
  layers (QSLs). Investigating the reconnection rates of the systems
  shows that the stronger the background field is, the more efficient
  the reconnection process of the flux in the respective fluxtubes.

---------------------------------------------------------
Title: Longitudinal intensity oscillations observed with TRACE:
    evidence of fine-scale structure
Authors: McEwan, M. P.; de Moortel, I.
2006A&A...448..763M    Altcode:
  The aim of this paper is two-fold: to increase the number of
  examples of observed longitudinal oscillations in coronal loops and
  to find evidence of the small temporal and spatial scales of these
  loop oscillations. Increasing the number of observed longitudinal
  oscillations allows for improvement in the statistics of the measured
  parameters, providing more accurate values for numerical and theoretical
  models. Furthermore, the small temporal and spatial scales of these
  loop oscillations could give indication of a driving force, symptomatic
  of coupling with the global p-modes. We found evidence that individual
  loop strands of wide coronal loop footpoints oscillate independently
  for short time periods. These strands have a diameter of the order
  of a few Mm, and the timescales on which the oscillations exist are
  typically less than an hour. We suggest that this is indicative of the
  oscillating strands being driven by the leakage of the global 5 min
  p-modes up into the corona, as simulated by De Pontieu et al. (2005,
  ApJ, 624, L61). Additionally, we find 25 further examples, added to
  those of De Moortel et al. (2002a, Sol. Phys., 209, 89), of outwardly
  propagating slow MHD waves in coronal loop footpoints. The datasets are
  taken from JOP83, observed between April 21st 2003 and May 3rd 2003, in
  the TRACE 171 Å bandpass. The intensity oscillations travel outwards
  with a propagation speed of order v = 99.7 ± 3.9 km s<SUP>-1</SUP>
  and they are of small amplitude, with variations of approximately
  3.7 ± 0.2 % of the background intensity. These disturbances are only
  detected for short distances, around 8.3 ± 0.6 Mm along the loops,
  and the main period of oscillation is around 300 s. A second peak of
  period was found at around 200 s, however no correlation with the
  presence of a sunspot was observed within this study. Using these
  measured parameters we have estimated the energy flux to be of order
  313 ± 26 erg cm<SUP>-2</SUP> s<SUP>-1</SUP>.

---------------------------------------------------------
Title: Propagating magnetohydrodynamics waves in coronal loops
Authors: De Moortel, I.
2006RSPTA.364..461D    Altcode:
  No abstract at ADS

---------------------------------------------------------
Title: 3D Numerical Simulations of Coronal Tectonics
Authors: De Moortel, I.; Galsgaard, K.
2006IAUS..233..149D    Altcode:
  We present the results of numerical simulations of 3D magnetic
  reconnection driven by photospheric footpoint motions. The model
  consists of two positive and two negative sources, which are placed
  on opposite boundaries of the cubic domain. Two different types
  of photospheric motions are then considered, namely rotating and
  twisting of the sources. These different footpoint motions result in a
  difference in the evolution of the magnetic skeleton and the location
  and efficiency of the energy build up. Both the dynamical evolution and
  the corresponding potential evolution of each system is investigated
  and a comparison is made between the energy storage and release that
  occurs at separators and separatrix surfaces.

---------------------------------------------------------
Title: An overview of coronal seismology
Authors: De Moortel, I.
2005RSPTA.363.2743D    Altcode:
  No abstract at ADS

---------------------------------------------------------
Title: D Numerical Simulations of Magnetic Reconnection Driven by
    Rotational Footpoint Motions
Authors: De Moortel, I.; Galsgaard, K.
2005ESASP.600E..22D    Altcode: 2005dysu.confE..22D; 2005ESPM...11...22D
  No abstract at ADS

---------------------------------------------------------
Title: Numerical Simulations of 3d Magnetic Reconnection due to
    Rotational Driving
Authors: De Moortel, I.; Galsgaard, K.
2005ESASP.596E..31D    Altcode: 2005ccmf.confE..31D
  No abstract at ADS

---------------------------------------------------------
Title: Tracing Coronal Waves Back to the Photosphere
Authors: De Pontieu, B.; Erdelyi, R.; De Moortel, I.; Metcalf, T.
2005AGUSMSH11C..03D    Altcode:
  There are now many observations of waves with periods around 5 minutes
  in the outer atmosphere of the Sun. We provide an observational
  overview of 5 minute periodicity in chromospheric spicules in active
  region plage, upper transition region moss and the low legs of coronal
  loops. Using a numerical model, we show that all of these phenomena
  are connected: normally evanescent photospheric oscillations can
  propagate into the low atmosphere as long as they are guided along
  magnetic field lines that are inclined away from the vertical. The
  leaked photospheric oscillations develop into shocks and lead to
  periodic upward chromospheric flows, which we have identified as
  active region spicules. These shocks continue upwards and enter
  into the corona. We suggest that TRACE observations of propagating
  acoustic waves in the corona are shocked and tunneled photospheric
  oscillations. Using SOHO/MDI, TRACE and Imaging Vector Magnetograph
  (Hawaii) data we explore how these coronal waves can be exploited to
  determine the connectivity between photosphere and corona,and thus
  allow seismology of the lower solar atmosphere.

---------------------------------------------------------
Title: How to Channel Photospheric Oscillations into the Corona
Authors: De Pontieu, B.; Erdélyi, R.; De Moortel, I.
2005ApJ...624L..61D    Altcode:
  There are now many observations of waves in the solar corona with
  periods around 5 minutes. The source of these waves is uncertain,
  although global p-modes in the photosphere are an obvious candidate,
  given the similarity of the dominant periods. However, p-modes are
  traditionally considered evanescent in the upper photosphere, and it
  has been unclear how they could propagate through the chromosphere
  into the corona. Using a numerical model, we show that photospheric
  oscillations with periods around 5 minutes can actually propagate into
  the corona so long as they are guided along an inclined magnetic flux
  tube. The nonverticality of the flux tube increases the acoustic cutoff
  period to values closer to the dominant periods of the photospheric
  oscillations, thus allowing tunneling or even direct propagation into
  the outer atmosphere. The photospheric oscillations develop into shocks,
  which drive chromospheric spicules and reach the corona. We suggest
  that Transition Region and Coronal Explorer (TRACE) observations of
  propagating magnetoacoustic waves in the corona represent these shocked
  and tunneled photospheric oscillations. We also explore how seismology
  of these waves could be exploited to determine the connectivity between
  photosphere and corona.

---------------------------------------------------------
Title: Coronal Seismology and the Propagation of Acoustic Waves
    along Coronal Loops
Authors: Klimchuk, J. A.; Tanner, S. E. M.; De Moortel, I.
2004ApJ...616.1232K    Altcode: 2004astro.ph.12085K
  We use a combination of analytical theory, numerical simulation, and
  data analysis to study the propagation of acoustic waves along coronal
  loops. We show that the intensity perturbation of a wave depends
  on a number of factors, including dissipation of the wave energy,
  pressure and temperature gradients in the loop atmosphere, work action
  between the wave and a flow, and the sensitivity properties of the
  observing instrument. In particular, the scale length of the intensity
  perturbation varies directly with the dissipation scale length (i.e.,
  damping length) and the scale lengths of pressure, temperature, and
  velocity. We simulate wave propagation in three different equilibrium
  loop models and find that dissipation and pressure and temperature
  stratification are the most important effects in the low corona where
  the waves are most easily detected. Velocity effects are small and
  cross-sectional area variations play no direct role for lines of
  sight that are normal to the loop axis. The intensity perturbation
  scale lengths in our simulations agree very well with the scale
  lengths we measure in a sample of loops observed by TRACE. The median
  observed value is 4.35×10<SUP>9</SUP> cm. In some cases the intensity
  perturbation increases with height, which is likely an indication of
  a temperature inversion in the loop (i.e., temperature that decreases
  with height). Our most important conclusion is that thermal conduction,
  the primary damping mechanism, is accurately described by classical
  transport theory. There is no need to invoke anomalous processes to
  explain the observations.

---------------------------------------------------------
Title: Photospheric Oscillations in the Solar Atmosphere: Driving
    Chromospheric Spicules and Coronal Waves
Authors: De Pontieu, B.; Erdelyi, R.; De Moortel, I.; Metcalf, T.
2004AGUFMSH13A1142D    Altcode:
  There are now many observations of oscillations and waves with periods
  around 5 minutes in the solar transition region and corona. We provide
  an observational overview of 5 minute periodicity in upper transition
  region moss, the low legs of coronal loops, and chromospheric spicules
  in active region plage. The source of the 5 minute periodicity is
  unclear, since photospheric p-modes are evanescent in the upper
  photosphere which should prevent them from propagating into the
  chromosphere, transition region and corona. Using a numerical model
  we show that photospheric oscillations can propagate into the low
  atmosphere as long as they are guided along a magnetic flux tube that is
  inclined away from the vertical. The leaked photospheric oscillations
  develop non-linearly into shocks at low chromospheric heights because
  of the density decrease with height. The upward traveling shocks and
  resulting rebound shocks of the chromosphere lead to periodic upward
  chromospheric flows, which in a recent paper we have identified as
  the periodic spicules that we observe in active region plage. After
  passage through the spicule, these shocked photospheric oscillations
  propagate into the corona. We suggest that TRACE observations of
  propagating acoustic waves in the corona are shocked and tunneled
  photospheric oscillations. We also explore whether these coronal waves
  can be exploited to determine the connectivity between photosphere
  and corona, and thus perform seismology of the lower solar atmosphere.

---------------------------------------------------------
Title: Coronal Seismology and the Propagation of Acoustic Waves
    Along Coronal Loops
Authors: Klimchuk, J. A.; Tanner, S. E.; De Moortel, I.
2004AGUFMSH24A..06K    Altcode:
  We use a combination of analytical theory, numerical simulation, and
  data analysis to study the propagation of acoustic waves along coronal
  loops. We show that the intensity perturbation of a wave depends
  on a number of factors, including dissipation of the wave energy,
  pressure and temperature gradients in the loop atmosphere, work action
  between the wave and a flow, and the sensitivity properties of the
  observing instrument. In particular, the scale length of the intensity
  perturbation varies directly with the dissipation scale length (i.e.,
  damping length) and the scale lengths of pressure, temperature, and
  velocity. We simulate wave propagation in three different equilibrium
  loop models and find that dissipation and pressure and temperature
  stratification are the most important effects in the low corona where
  the waves are most easily detected. Velocity effects are small, and
  cross-sectional area variations play no direct role for lines-of-sight
  that are normal to the loop axis. The intensity perturbation scale
  lengths in our simulations agree very well with the scale lengths we
  measure in a sample of loops observed by TRACE. The median observed
  value is 4.35×10<SUP>9</SUP> cm. In some cases the intensity
  perturbation increases with height, which is likely an indication of
  a temperature inversion in the loop (i.e., temperature that decreases
  with height). Our most important conclusion is that thermal conduction,
  the primary damping mechanism, is accurately described by classical
  transport theory. There is no need to invoke anomalous processes to
  explain the observations.

---------------------------------------------------------
Title: The damping of slow MHD waves in solar coronal magnetic
    fields. III. The effect of mode coupling
Authors: De Moortel, I.; Hood, A. W.; Gerrard, C. L.; Brooks, S. J.
2004A&A...425..741D    Altcode:
  The properties of slow MHD waves in a two dimensional model are
  investigated, in a low-beta plasma. Including a horizontal density
  variation causes “phase mixing” and coupling between slow and fast
  MHD waves. The effects of different density profiles, different driving
  frequencies, different values for the viscosity coefficient and plasma
  beta (&lt;1) are studied. Using numerical simulations, it was found
  that the behaviour of the perturbed velocity was strongly dependent
  on the values of the parameters. From analytical approximations, a
  strong interaction with the fundamental, normal modes of the system
  was found to play an important role. The coupling to the fast wave
  proved to be an inefficient way to extract energy from the driven
  slow wave and is unlikely to be responsible for the rapid damping of
  propagating slow MHD waves, observed by TRACE. The “phase mixing”
  of the slow waves due to the (horizontal) density inhomogeneity does
  cause a significant amount of damping, but is again unlikely to be
  sufficiently strong to explain the rapid observed damping.

---------------------------------------------------------
Title: Waves and wavelets: An automated detection technique for
    solar oscillations
Authors: De Moortel, I.; McAteer, R. T. J.
2004SoPh..223....1D    Altcode: 2004SoPh..223....1M
  This paper investigates the possibility of automating the detection
  of propagating intensity perturbations in coronal loops using
  wavelet analysis. Two different sets of TRACE 171 Å images are
  studied using the automated wavelet routine presented by McAteer et
  al. (2004). Both localised, short-lived periodicities and sustained,
  periodic, oscillations are picked up by the routine, with the results
  dependent to a large extent on the signal-to-noise ratio of the
  dataset. At present, the automation is only partial; the relevance
  of the detected periodicity and the identification of the coronal
  structure supporting it still have to be determined by the user, as
  does the judging of the accuracy of the results. Care has to be taken
  when interpreting the results of the wavelet analysis, and a good
  knowledge of all possible factors that might influence or distort the
  results is a necessity. Despite these limitations, wavelet analysis
  can play an important role in automatically identifying a variety of
  phenomena and in the analysis of the ever-growing (observational or
  simulated) datasets.

---------------------------------------------------------
Title: Wavelet Analysis: the effect of varying basic wavelet
    parameters
Authors: De Moortel, I.; Munday, S. A.; Hood, A. W.
2004SoPh..222..203D    Altcode:
  The most commonly used methods to analyse (observed) quasi-periodic
  signals are standard techniques such as Fourier and wavelet
  analysis. Whereas a Fourier transform provides information on the
  dominant frequencies, wavelet analysis has the added advantage of
  providing the time localisation of the various frequency components. The
  usefulness and robustness of wavelet analysis is investigated by varying
  the different parameters which characterise the `mother' wavelet. We
  examine the effect of varying these parameters on the temporal and
  frequency resolution and the damping profile, which can be obtained
  from the wavelet transform. Additionally, the effect of a changing
  periodicity on the wavelet transform is investigated. Both simple
  harmonic functions and intensity oscillations observed by TRACE are
  used to demonstrate the various advantages and disadvantages of the
  different methods. In general, using the Paul wavelet or a smaller
  value of the wavelet parameter k provides a better time resolution,
  whereas the Morlet wavelet or a larger value of k improves the frequency
  resolution. Overall, our results indicate that great care is needed
  when using a wavelet analysis and that all the possible factors that
  could affect the transform should be taken into consideration.

---------------------------------------------------------
Title: Acoustic Wave Interpretation of Propagating Intensity
    Disturbances in Coronal Loops
Authors: Klimchuk, J. A.; Tanner, S. E. M.; De Moortel, I.
2004AAS...204.9503K    Altcode: 2004BAAS...36..826K
  Intensity disturbances have been observed by TRACE and EIT to propagate
  upward along the legs of long active region coronal loops. The
  periodic nature and speed of these disturbances suggest that they
  are traveling acoustic waves. It is being debated, however, whether
  the damping of the perturbations is consistent with the acoustic
  wave interpretation. We here examine this issue in detail with a
  combination of numerical simulation, analytical theory, and improved
  analysis of the observations. Using our state-of-the-art 1D hydro code,
  we simulate the propagation of waves generated at the base of model
  coronal loops. We consider static equilibrium loops having constant and
  expanding cross-section, and an equilibrium loop with steady flow. We
  show that the amplitude of the intensity perturbation is affected by
  a number of factors: wave dissipation (direct plasma heating), work
  done by the wave on the flow, pressure stratification, nonuniform
  temperature, and temperature-dependent sensitivity of the observing
  instrument. We compare our theoretical results with intensity scale
  lengths measured in a sample of loops observed by TRACE. <P />Research
  supported by NASA and ONR.

---------------------------------------------------------
Title: Observations and theory of slow waves in coronal loops
Authors: De Moortel, I.; Hood, A. W.
2004AAS...204.9502D    Altcode: 2004BAAS...36..826D
  High cadence TRACE observations show that outward propagating intensity
  disturbances are a common feature in large, quiescent coronal loops,
  close to active regions. An overview is given of measured parameters
  of such longitudinal oscillations in coronal loops. The observed
  oscillations are interpreted as propagating slow magneto-acoustic
  waves and are unlikely to be flare-driven. A theoretical model of slow
  magneto-acoustic waves, incorporating the effects of gravitational
  stratification, the magnetic field geometry, thermal conduction and
  compressive viscosity is presented to explain the very short observed
  damping lengths. The results of these numerical simulations are compared
  with the TRACE observations. Preliminary results indicate that thermal
  conduction and the magnetic field geometry play an important role.

---------------------------------------------------------
Title: The damping of slow MHD waves in solar coronal magnetic
    fields. II. The effect of gravitational stratification and field
    line divergence
Authors: De Moortel, I.; Hood, A. W.
2004A&A...415..705D    Altcode:
  This paper continues the study of De Moortel &amp; Hood
  (\cite{Moortelh03}) into the propagation of slow MHD waves in the
  solar corona. Firstly, the damping due to optically thin radiation
  is investigated and compared to the effect of thermal conduction. In
  a second stage, gravitational stratification is included in the
  model and it is found that this increases the damping length
  significantly. Finally, the effect of different magnetic field
  geometries on the damping of the slow waves is investigated. As a
  first approximation, a purely radial magnetic field is considered
  and although the amplitudes of the perturbations decrease due to the
  divergence of the field, the effect is small compared to the effect of
  thermal conduction. A more realistic local geometry, estimated from the
  observations, is investigated and it is demonstrated that a general
  area divergence can cause a significant, additional, decrease of the
  amplitudes of the perturbations. The results of numerical simulations,
  incorporating the effects of gravitational stratification, the
  magnetic field geometry and thermal conduction are compared with TRACE
  observations of propagating waves in coronal loops. It is found that a
  combination of thermal conduction and (general) area divergence yields
  detection lengths that are in good agreement with observed values.

---------------------------------------------------------
Title: Time-Frequency Analysis of Quasi-Periodic Signals
Authors: De Moortel, I.; Munday, S.; Hood, A. W.
2004ESASP.547..501D    Altcode: 2004soho...13..501D
  In recent years, the analysis of quasi-periodic signals observed by
  satellites such as SOHO and TRACE has become increasingly important. So
  far, mostly standard methods have been used, such as Fourier analysis
  to identify the dominant frequencies and wavelet analysis to provide
  the time localisation of the various frequency components. We compare
  the temporal and frequency resolution of different `time-frequency'
  methods. In particular, the usefulness and robustness of wavelet
  analysis is investigated by varying the different parameters which
  characterise the `mother' wavelet. Both simple harmonic functions and
  intensity oscillations observed by TRACE are used to demonstrate the
  various advantages and disadvantages of the different methods.

---------------------------------------------------------
Title: A Search for Photospheric Sources of Coronal Longitudinal
    Oscillations
Authors: Ireland, J.; De Moortel, I.; Walsh, R. W.; Moretti, P. F.
2004ESASP.547...57I    Altcode: 2004soho...13...57I
  It has recently been shown that longitudinal intensity fluctuations
  observed in TRACE 171 Å loops come in what appear to be two separate
  populations. These populations are differentiated by their period, and
  are clustered distinctly around 3 and 5 minute periods. The 3 minute
  fluctuations appear to be rooted in sunspots, whereas the 5 minute
  sunspots are not. This study presents two test cases in the search
  for a photospheric source to these oscillations. A wavelet analysis
  is presented in the search for a fluctuating magnetic component since
  previous studies show that a magnetic fluctuation may be intermittent. A
  Fourier analysis is used to look in the intensity and Doppler regions of
  the same area of interest. Some comments are made on the photosphere in
  relation to the search for the driver of the as yet unobserved driver
  of longitudinal coronal oscillations.

---------------------------------------------------------
Title: Longitudinal Oscillations in Coronal Loops - Joint Observations
    with SOHO/CDS and TRACE
Authors: Marsh, M. S.; Walsh, R. W.; De Moortel, I.; Ireland, J.
2004ESASP.547..519M    Altcode: 2004soho...13..519M
  Joint Observing Program (JOP) 83 Solar and Heliospheric
  Observatory/Coronal Diagnostic Spectrometer (SOHO/CDS) and Transition
  Region and Coronal Explorer (TRACE) data is analysed for evidence of
  propagating intensity oscillations along loop structures in the solar
  corona. A propagating intensity oscillation with a minimum estimated
  speed of 50-195 km s is observed within a TRACE 171 Å coronal loop
  using a running difference method. Co-spatial and co-temporal CDS
  and TRACE observations of this loop are analysed using a wavelet
  analysis method. The TRACE data shows a propagating oscillation with
  a period of 300 s. This period is also observed with CDS suggesting
  propagating oscillations at chromospheric, transition region and
  coronal temperatures in the He I, O V and Mg IX lines.

---------------------------------------------------------
Title: Observations and Theory of Longitudinal Waves in Coronal Loops
Authors: De Moortel, I.; Hood, A. W.; De Pontieu, B.
2004ESASP.547..427D    Altcode: 2004soho...13..427D
  High cadence TRACE observations show that outward propagating
  intensity disturbances are a common feature in large, quiescent
  coronal loops, close to active regions. An overview is given of
  measured parameters of such longitudinal oscillations in coronal
  loops. The observed oscillations are interpreted as propagating slow
  magnetoacoustic waves and are unlikely to be flare-driven. A basic
  magnetic field extrapolation is used to estimate the local geometry
  of the magnetic field. A theoretical model of slow magneto-acoustic
  waves, incorporating the effects of gravitational stratification, the
  magnetic field geometry, thermal conduction and compressive viscosity
  is presented to explain the very short observed damping lengths. The
  results of these numerical simulations are compared with the TRACE
  observations. Preliminary results indicate that the magnetic field
  geometry plays an important role.

---------------------------------------------------------
Title: The damping of slow MHD waves in solar coronal magnetic fields
Authors: De Moortel, I.; Hood, A. W.
2003A&A...408..755D    Altcode:
  A theoretical description of slow MHD wave propagation in the solar
  corona is presented. Two different damping mechanisms, namely thermal
  conduction and compressive viscosity, are included and discussed in
  detail. We revise the properties of the “thermal” mode, which is
  excited when thermal conduction is included. The thermal mode is
  purely decaying in the case of standing waves, but is oscillatory
  and decaying in the case of driven waves. When thermal conduction
  is dominant, the waves propagate largely undamped, at the slower,
  isothermal sound speed. This implies that there is a minimum damping
  time (or length) that can be obtained by thermal conduction alone. The
  results of numerical simulations are compared with TRACE observations
  of propagating waves, driven by boundary motions, and standing waves
  observed by SUMER/SOHO, excited by an initial impulse. For typical
  coronal conditions, thermal conduction appears to be the dominant
  damping mechanism.

---------------------------------------------------------
Title: Determination of coronal loop properties from trace
    observations
Authors: De Moortel, I.; Parnell, C. E.; Hood, A. W.
2003SoPh..215...69D    Altcode:
  In this paper, we determine the temperature profile along the footpoints
  of large coronal loops observed by TRACE in both the 171 Å and 195
  Å passbands. The temperature along the lower part of these coronal
  loops only shows small variations and can probably be considered to
  be isothermal. Using the obtained temperature profile T(s) and an
  estimate of the column depth along the loop, we then determine the
  pressure along the lower part of the observed coronal loops and hence
  the value of the pressure scale length. The obtained scale lengths
  correspond in order-of-magnitude with the theoretically predicted
  gravitational scale height. We show that the differences between
  the observed and predicted scale heights are unlikely to be caused by
  (significant) flows along the loops but could possibly be a consequence
  of the inclination of the loops. This implies that the quasi-periodic
  intensity oscillations observed in the loops are most probably caused
  by compressive waves propagating upward at the coronal sound speed.

---------------------------------------------------------
Title: Joint observations of propagating oscillations with SOHO/CDS
    and TRACE
Authors: Marsh, M. S.; Walsh, R. W.; De Moortel, I.; Ireland, J.
2003A&A...404L..37M    Altcode:
  Joint Observing Program (JOP) 83 Solar and Heliospheric
  Observatory/Coronal Diagnostic Spectrometer (SOHO/CDS) and Transition
  Region and Coronal Explorer (TRACE) data is analysed for evidence of
  propagating intensity oscillations along loop structures in the solar
  corona. A propagating intensity oscillation with a minimum estimated
  speed of 50-195 km s<SUP>-1</SUP> is observed within a TRACE 171
  Å coronal loop using a running difference method. Co-spatial and
  co-temporal CDS and TRACE observations of this loop are analysed
  using a wavelet analysis method. The TRACE data shows a propagating
  oscillation with a period of ~300 s. This period is also observed with
  CDS suggesting propagating oscillations at chromospheric, transition
  region and coronal temperatures in the He I, O V and Mg Ix lines.

---------------------------------------------------------
Title: Hydrodynamic Simulations of Longitudinal Intensity Oscillations
    Observed in Coronal Loops by TRACE
Authors: Tanner, S. E.; Klimchuk, J. A.; Hood, A. W.; De Moortel, I.
2003SPD....34.0406T    Altcode: 2003BAAS...35..811T
  Propagating intensity disturbances are often observed by TRACE in
  large coronal loops located at the perimeters of active regions
  (e.g., De Moortel et al., 2002, Solar Phys., 209, 61). On average,
  the disturbances have periods of 280 s, propagation speeds of 120
  km s<SUP>-1</SUP>, intensity amplitudes of 4%, and surprisingly
  small damping (detection) lengths of 9000 km. In addition, there
  is a positive correlation between damping length and period. The
  preliminary interpretation of these disturbances is that they are
  rapidly dissipating slow magneto-acoustic waves. <P />To investigate
  this interpretation more rigorously, we have performed a series of
  detailed coronal loop simulations using our 1D hydrodynamic code,
  ARGOS. We generate waves in the loop by imposing a spatially localized
  oscillating force at the loop footpoint, using a range of different
  oscillation periods. We here report on the results of our study and,
  in particular, whether the damping lengths have the properties observed
  by TRACE. <P />This work was supported by NASA and ONR.

---------------------------------------------------------
Title: Thermal conduction damping of longitudinal waves in coronal
    loops
Authors: De Moortel, I.; Hood, A. W.
2003PADEU..13..127D    Altcode:
  High cadence TRACE observations show that outward propagating intensity
  disturbances are a common feature in large coronal loops. An overview
  is given of measured parameters of such longitudinal waves in coronal
  loops. We found that loops that are situated above sunspot regions
  display intensity oscillations with periods centred around 3 minutes,
  whereas oscillations in `non-sunspot' loops show periods centred
  around 5 minutes. The observed longitudinal waves are interpreted
  as propagating slow magneto-acoustic waves and we show that the
  disturbances are not flare-driven but are most likely caused by
  an underlying driver exciting the loop footpoints. We found that
  (slightly enhanced) thermal conduction could account for the observed
  damping lengths.

---------------------------------------------------------
Title: An overview of longitudinal oscillations in coronal loops
Authors: De Moortel, I.; Hood, A. W.; Ireland, J.; Walsh, R. W.
2002ESASP.506..509D    Altcode: 2002svco.conf..509D; 2002ESPM...10..509D
  High cadence TRACE observations show that outward propagating
  intensity disturbances are a common feature in large, quiescent coronal
  loops. An overview is given of geometric and physical parameters of
  such propagating disturbances observed in 38 coronal loops. We found
  that loops that are situated above sunspot regions display intensity
  oscillations with periods centred around 3 minutes, whereas oscillations
  in 'non-sunspot' loops show periods centred around 5 minutes. The
  observed longitudinal oscillations are interpreted as propagating
  slow magneto-acoustic waves and we show that the disturbances are
  not flare-driven but are most likely caused by an underlying driver
  exciting the loop footpoints. We present a simple theoretical model
  to explain the observed features.

---------------------------------------------------------
Title: Observational evidence of underlying driving of longitudinal
    oscillations in coronal loops
Authors: De Moortel, I.; Ireland, J.; Hood, A. W.; Walsh, R. W.
2002ESASP.505..211D    Altcode: 2002IAUCo.188..211D; 2002solm.conf..211D
  We give an overview of both geometric and physical parameters of
  propagating disturbances in coronal loops, using high cadence TRACE
  data (JOP83 &amp; JOP144). The majority of these outward propagating
  oscillations are found in the footpoints of large diffuse coronal loop
  structures, close to active regions. The disturbances travel outward
  with a propagation speed v = 122±43 km s<SUP>-1</SUP>. The variations
  in intensity are estimated to be of the order of 4.1±1.5%, compared
  to the background brightness and are found to be damped very quickly,
  within 8.9±4.4 Mm along the loop. Using a wavelet analysis, periods in
  the 282±93 seconds range are obtained. However, it was found that loops
  that are situated above sunspot regions display intensity oscillations
  with a period smaller than 200 seconds, whereas oscillations in
  'non-sunspot' loops show periods larger than 200 seconds. This result
  provides evidence that the underlying oscillations can propagate
  through the transition region and into the corona. We conclude that
  the observed longitudinal oscillations are not flare-driven but are
  most likely caused by an underlying driver exciting the loop footpoints.

---------------------------------------------------------
Title: Examination of the photospheric magnetic field underlying
    longitudinally oscillating coronal loops
Authors: Ireland, J.; Walsh, R. W.; De Moortel, I.; Moretti, P. F.
2002ESASP.505..429I    Altcode: 2002IAUCo.188..429I; 2002solm.conf..429I
  Longitudinally oscillating coronal loops have been seen in TRACE 171
  Å data in many different quiescent active regions. The oscillation
  is thought to be an example of an outwardly propagating slow
  magneto-acoustic wave. However, the source of these waves is as
  yet unknown. In the context of SOHO Joint Observing Program 144, we
  search for a possible photospheric driver to these waves. We examine
  the photospheric longitudinal magnetic flux underlying an oscillating
  loop observed between 1200-1300 UT on June 7th 2001. The field was
  imaged using the Kanzelhöhe Magneto-Optical Filter instrument and the
  SOHO Michelson Doppler Imager (MDI). The dynamics of the photospheric
  magnetic field underlying these loops is discussed in the context of
  possible mechanisms causing the observed coronal oscillations.

---------------------------------------------------------
Title: Longitudinal intensity oscillations in coronal loops observed
    with TRACE   II. Discussion of Measured Parameters
Authors: De Moortel, I.; Hood, A. W.; Ireland, J.; Walsh, R. W.
2002SoPh..209...89D    Altcode:
  In this paper, we give a detailed discussion of the parameters of
  longitudinal oscillations in coronal loops, described in Paper I. We
  found a surprising absence of correlations between the measured
  variables, with the exception of a relation between the estimated
  damping length and the period of the intensity variations. Only for
  2 out of the 38 cases presented in Paper I did we find a significant
  perturbation in the 195 Å TRACE data. The loops supporting the
  propagating disturbances were typically stable, quiescent loops and
  the total luminosity of the analyzed structures generally varied by
  no more than 10%. The observed density oscillations are unlikely to be
  flare-driven and are probably caused by an underlying driver exciting
  the loop footpoints. It was demonstrated that the rapid damping of
  the perturbations could not simply be explained as a consequence
  of the decreasing intensity along the loops. However, we found that
  (slightly enhanced) thermal conduction alone could account for the
  observed damping lengths and wavelengths, and, additionally, explain
  the correlation between propagation period and damping length.

---------------------------------------------------------
Title: Longitudinal intensity oscillations in coronal loops observed
    with TRACE   I. Overview of Measured Parameters
Authors: De Moortel, I.; Ireland, J.; Walsh, R. W.; Hood, A. W.
2002SoPh..209...61D    Altcode:
  In this paper we aim to give a comprehensive overview of geometric
  and physical properties of longitudinal oscillations in large coronal
  loops. The 38 examples of propagating disturbances were obtained
  from the analysis of high cadence, 171 Å TRACE data (JOP 83 and JOP
  144). The majority of these outward propagating oscillations are found
  in the footpoints of large diffuse coronal loop structures, close to
  active regions. The disturbances travel outward with a propagation
  speed of the order of v≈122±43 km s<SUP>−1</SUP>. The variations
  in intensity are estimated to be roughly 4.1±1.5% of the background
  loop brightness. The propagating disturbances are found to be damped
  very quickly and are typically only detected in the first 8.9±4.4
  Mm along the loop. Using a wavelet analysis, periods of the order
  of 282±93 s are found and the energy flux was estimated as 342±126
  erg cm<SUP>−2</SUP> s<SUP>−1</SUP>. We found highly filamentary
  behavior in the lower part of the coronal loops and showed that the
  intensity oscillations can be present for several consecutive hours,
  with a more or less constant period. It is evident that the longitudinal
  oscillations are a widespread, regularly occurring coronal phenomena. A
  companion paper is devoted to the interpretation and discussion of
  the results.

---------------------------------------------------------
Title: Application of wavelet analysis to transversal coronal loop
    oscillations
Authors: Ireland, J.; De Moortel, I.
2002A&A...391..339I    Altcode:
  There as yet remain few examples of well observed, transversal
  oscillations in coronal loops. Such oscillations have the potential
  to yield much information on the nature of the solar corona, as
  demonstrated by the analysis of Nakariakov et al. (\cite{nak})
  of a transversely oscillating loop observed in the TRACE 171 Å
  passband on 14th July, 1998. Their analysis extracts a decaying loop
  oscillation signal from the data which is then considered in the light
  of the substantial body of theoretically and computationally derived
  knowledge of the dynamics of coronal loops. The analysis presented in
  this paper approaches the reduction of the same dataset using wavelet
  techniques described by De Moortel &amp; Hood (\cite{demhood}) and De
  Moortel et al. (\cite{dhi}). The authors show that the value of the
  decay exponent N in a decaying oscillating time series of the form exp
  (-kt<SUP>N</SUP>) is measurable from a wavelet transform of the time
  series (for some decay constant k and time t). The application of
  these techniques shows that the value of the decay exponent in the
  14th July, 1998 event is not well determined by the data, i.e., the
  associated error is very large. Since the value of the decay exponent
  implies the presence of particular decay mechanisms and not others,
  the large error associated with the exponent value implies that a wide
  range of mechanisms should be considered when discussing the physics
  behind this event. Comments are also made on the time dependence of
  the oscillation wavelet scale. Two additional examples of transversal
  coronal loop oscillations are also analysed.

---------------------------------------------------------
Title: Preliminary description of Kanzelhöhe/MDI magnetograms and
    the search for sources of coronal oscillations
Authors: Ireland, J.; Walsh, R. W.; De Moortel, I.; Moretti, P. F.
2002ESASP.508..299I    Altcode: 2002soho...11..299I
  Many examples of transverse (Schrijver et al., 2002; Aschwanden
  et al., 2002) and longitudinal coronal loop oscillations have now
  been observed in TRACE 171 Å data (see De Moortel et al., 2002
  at this meeting for examples of longitudinal oscillations). These
  oscillations hold the promise of telling us much about the physics of
  the corona. However, the mechanisms describing these distinct phenomena
  are as yet unclear. Magnetogram data from MDI and Kanzelhöhe taken
  as part of SOHO Joint Observing 144 allows us to use the spatial
  resolution of MDI and temporal resolution of Kanzelhöhe to probe the
  photospheric magnetic field at likely footpoint sources of coronal
  loop oscillations at length and time scales not available to either
  instrument separately. Variations in the photospheric magnetic field
  are analysed in conjunction with co-temporally observed TRACE 171 Å
  derived time series.

---------------------------------------------------------
Title: Trace observations of propagating slow magneto-acoustic
    disturbances in coronal loops
Authors: De Moortel, I.; Ireland, J.; Walsh, R. W.
2002ESASP.508..275D    Altcode: 2002soho...11..275D
  We study propagating disturbances in 38 coronal loops and give an
  overview of their properties using high cadence, 171 Å, TRACE data
  (JOP 83 &amp; JOP 144). The majority of these outward propagating
  oscillations are found in the footpoints of large diffuse coronal loop
  structures, close to active regions. The disturbances travel outward
  with a propagation speed of the order of v ≍ 119+/-39 km/s. The
  variations in intensity are estimated to be roughly 4.1+/-1.6% of the
  background brightness and the propagating disturbances are found to
  be damped very quickly, within 8.6+/-3.8 Mm along the loop. Using a
  wavelet analysis, periods of the order of 282+/-93 seconds are found
  and the energy flux was estimated as 346+/-132 ergs/cm<SUP>2</SUP>s. It
  is suggested that these oscillations are slow magneto-acoustic waves
  propagating along the lower part of large, quiescent, coronal loops.

---------------------------------------------------------
Title: The detection of 3 &amp; 5 min period oscillations in
    coronal loops
Authors: De Moortel, I.; Ireland, J.; Hood, A. W.; Walsh, R. W.
2002A&A...387L..13D    Altcode:
  High cadence, 171 Alfvén A, TRACE observations show that outward
  propagating intensity disturbances are a common feature in large,
  quiescent coronal loops. These oscillations are interpreted as
  propagating slow magneto-acoustic waves. Using a wavelet analysis, we
  found periods of the order of 282 +/- 93 s. However, a careful study of
  the location of the footpoints revealed a distinct separation between
  those loops that support oscillations with periods smaller than 200 s
  and periods larger than 200 s. It was found that loops that are situated
  above sunspot regions display intensity oscillations with a period
  of the order of 172 +/- 32 s, whereas oscillations in “non-sunspot”
  loops show periods of the order of 321 +/- 74 s. We conclude that the
  observed longitudinal oscillations are not flare-driven but are most
  likely caused by an underlying driver exciting the loop footpoints. This
  result suggests that the underlying oscillations can propagate through
  the transition region and into the corona.

---------------------------------------------------------
Title: Coronal seismology through wavelet analysis
Authors: De Moortel, I.; Hood, A. W.; Ireland, J.
2002A&A...381..311D    Altcode:
  This paper expands on the suggestion of De Moortel &amp; Hood
  (\cite{DeMoortel00}) that it will be possible to infer coronal plasma
  properties by making a detailed study of the wavelet transform of
  observed oscillations. TRACE observations, taken on 14 July 1998, of a
  flare-excited, decaying coronal loop oscillation are used to illustrate
  the possible applications of wavelet analysis. It is found that a decay
  exponent n ~ 2 gives the best fit to the double logarithm of the wavelet
  power, thus suggesting an e<SUP>-varepsilon t^2</SUP> damping profile
  for the observed oscillation. Additional examples of transversal loop
  oscillations, observed by TRACE on 25 October 1999 and 21 March 2001,
  are analysed and a damping profile of the form e<SUP>-varepsilon
  t^n</SUP>, with n ~ 0.5 and n ~ 3 respectively, is suggested. It is
  demonstrated that an e<SUP>-varepsilon t^n</SUP> damping profile of
  a decaying oscillation survives the wavelet transform, and that the
  value of both the decay coefficient varepsilon and the exponent n can
  be extracted by taking a double logarithm of the normalised wavelet
  power at a given scale. By calculating the wavelet power analytically,
  it is shown that a sufficient number of oscillations have to be present
  in the analysed time series to be able to extract the period of the
  time series and to determine correct values for both the damping
  coefficient and the decay exponent from the wavelet transform.

---------------------------------------------------------
Title: Wavelet analysis and the determination of coronal plasma
    properties
Authors: De Moortel, I.; Hood, A. W.
2000A&A...363..269D    Altcode:
  The usefulness of wavelet analysis is demonstrated by considering
  analytical expressions for phase mixed Alfvén waves in different
  physical circumstances. The wavelet analysis is briefly introduced,
  using the complex-valued Morlet wavelet, consisting of a plane wave
  modulated by a Gaussian, as the basic wavelet. The time and scale
  resolution of the wavelet transform are then discussed in more
  detail, by working out the transform of simple harmonic functions
  analytically. As an illustration of the power of wavelet analysis, phase
  mixed Alfvén waves are investigated. A comparison is made between a
  truly finite harmonic wave and an Alfvén wave, dissipated by phase
  mixing and, using the wavelet transform, it is demonstrated that it
  is possible to distinguish between these two `finite' signals. It
  is also possible to extract the value of the dissipation coefficient
  from the wavelet transform. When considering phase mixing of Alfvén
  waves in a gravitationally stratified atmosphere, the lengthening of
  the wavelengths is clearly evident in the transform, which provides
  an independent estimate of the value of the pressure scale height. In
  a radially diverging atmosphere, the shortening of the wavelengths is
  also apparent in the wavelet transform, showing how the Alfvén speed
  varies along the loop and thus providing information on the coronal
  density and magnetic field. When applying wavelet analysis to observed
  wave-like oscillations, it should be possible to infer properties of
  the coronal plasma by making a detailed study of the wavelet transform.

---------------------------------------------------------
Title: Observation of oscillations in coronal loops
Authors: De Moortel, I.; Walsh, R. W.; Ireland, J.
2000AIPC..537..216D    Altcode: 2000wdss.conf..216D
  High cadence TRACE data (JOP 83) in the 171 Å bandpass are used to
  report on several examples of outward propagating oscillations in the
  footpoints of large diffuse coronal loop structures close to active
  regions. The disturbances travel outward with a propagation speed
  between 70 and 160 km s<SUP>-1</SUP>. The variations in intensity are
  of the order of 2%-4%, compared to the background brightness and these
  get weaker as the disturbance propagates along the structure. From a
  wavelet analysis at different positions along the structures, periods
  in the 200-400 seconds range are found. It is suggested that these
  oscillations are slow magneto-acoustic waves propagating along the
  loop, carrying an estimated energy flux of 4×10<SUP>2</SUP> ergs
  cm<SUP>-2</SUP> s<SUP>-1</SUP>. .

---------------------------------------------------------
Title: Phase mixing of Alfvén waves in an open and stratified
    atmosphere
Authors: De Moortel, I.; Hood, A. W.; Arber, T. D.
2000AIPC..537..224D    Altcode: 2000wdss.conf..224D
  Phase mixing was introduced by Heyvaerts and Priest [1] as a mechanism
  for heating plasma in open magnetic field regions. Here we include a
  stratified density and a diverging background magnetic field. We present
  numerical and WKB solutions to describe the effect of stratification
  and divergence on phase mixing of Alfvén waves. It is shown that
  the decrease in density lengthens the oscillation wavelengths and
  thereby reduces the generation of transverse gradients. However,
  the divergence of the field lines shortens the wavelengths and thus
  enhances the generation of gradients. Furthermore we found that in
  a stratified atmosphere, ohmic heating is spread out over a greater
  height range whereas viscous heating is not strongly influenced by
  the stratification. A wavelet analysis indicated that the wavelet
  transform could provide us with information about the medium the waves
  are traveling through. .

---------------------------------------------------------
Title: Observation of oscillations in coronal loops
Authors: De Moortel, I.; Ireland, J.; Walsh, R. W.
2000A&A...355L..23D    Altcode:
  On March 23rd 1999, a set of TRACE observations in the 171 Alfvén A
  (Fe Ix) bandpass was made of active region AR 8496. A wavelet analysis
  of a bright loop-footpoint to the south west of this active region
  displays outward propagating perturbations with periods 180-420
  seconds at approximately 70-165 km s<SUP>-1</SUP>. We suggest that
  these oscillations are slow magneto-acoustic waves propagating along
  the loop, carrying an estimated energy flux of 4 x 10<SUP>2</SUP>
  ergs cm<SUP>-2</SUP> s<SUP>-1</SUP>.

---------------------------------------------------------
Title: Phase mixing of Alfvén waves in a stratified and radially
    diverging, open atmosphere
Authors: De Moortel, I.; Hood, A. W.; Arber, T. D.
2000A&A...354..334D    Altcode:
  Phase mixing was proposed by Heyvaerts and Priest (1983) as a mechanism
  for heating the plasma in open magnetic field regions of coronal
  holes. Here the basic model is modified to include a gravitationally
  stratified density and a diverging background magnetic field. We
  present WKB solutions and use a numerical code to describe the effect
  of dissipation, stratification and divergence on phase mixing of
  Alfvén\ waves. It is shown that the wavelengths of an Alfvén\ wave is
  shortened as it propagates outwards which enhances the generation of
  gradients. Therefore, the convection of wave energy into heating the
  plasma occurs at lower heights than in a uniform model. The combined
  effect of a stratified density and a radially diverging background
  magnetic field on phase mixing of Alfvén\ waves depends strongly on
  the particular geometry of the configuration. Depending on the value
  of the pressure scale height, phase mixing can either be more or less
  efficient than in the uniform case.

---------------------------------------------------------
Title: Phase Mixing of Alfvén Waves in an Open and Stratified
    Atmosphere
Authors: De Moortel, I.; Hood, A. W.; Arber, T. D.
1999ESASP.448..257D    Altcode: 1999ESPM....9..257D; 1999mfsp.conf..257D
  No abstract at ADS

---------------------------------------------------------
Title: Phase mixing of Alfvén waves in a stratified and open
    atmosphere
Authors: De Moortel, I.; Hood, A. W.; Ireland, J.; Arber, T. D.
1999A&A...346..641D    Altcode:
  Phase mixing was introduced by Heyvaerts and Priest (1983) as a
  mechanism for heating the plasma in the open magnetic field regions
  of coronal holes. Here the basic process is modified to include a
  stratified atmosphere in which the density decreases with height. We
  present an analytical solution in the case of zero dissipation and
  use a numerical code in the non-zero dissipation case to describe the
  effect of stratification on phase mixing. The exponential damping
  behaviour derived by Heyvaerts and Priest is largely confirmed in
  the non stratified limit. However, it is shown that the decrease in
  density lengthens the oscillation wavelengths and thereby reduces the
  generation of transverse gradients. Furthermore we found that in a
  stratified atmosphere the perturbed magnetic field and velocity behave
  quite differently depending on whether we consider resistivity or
  viscosity. Ohmic heating is spread out over a greater height range in
  a stratified medium whereas viscous heating is not strongly influenced
  by the stratification.